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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT5G19490   Histone superfamily protein 
 ath-m.9   AT5G19490   Histone superfamily protein 
 ath-m.4.bio   AT5G19490   Histone superfamily protein 
 ath-m.4.hor   AT5G19490   Histone superfamily protein 
 ath-m.4.str   AT5G19490   Histone superfamily protein 
 ath-m.4.tis   AT5G19490   Histone superfamily protein 
 ath-u.5   NF-YC11   nuclear factor Y, subunit C11 
 bra-r.6   103851275   dr1-associated corepressor 
 bra-r.6   103859444   dr1-associated corepressor 
 bra-r.6   103845524   dr1-associated corepressor 
 ghi-r.1   107963203   uncharacterized LOC107963203 
 ghi-r.1   107959275   dr1-associated corepressor 
 ghi-r.1   107928025   dr1-associated corepressor homolog 
 cit-r.1   102618305   uncharacterized LOC102618305 
 gma-u.5   100801593   class 2 transcription repressor NC2 alpha 6 
 gma-u.5   100779786   class 2 transcription repressor NC2 alpha 5 
 gma-u.5   100810093   class 2 transcription repressor NC2 alpha 3 
 vvi-u.5   100255768   transcription regulator complex subunit bur6 
 vvi-u.5   100253016   uncharacterized LOC100253016 
 ppo-u.5   7460270   uncharacterized LOC7460270 
 ppo-u.5   7455795   uncharacterized LOC7455795 
 mtr-u.5   25488573   dr1-associated corepressor homolog 
 mtr-u.5   11430503   dr1-associated corepressor homolog 
 mtr-u.5   11424560   dr1-associated corepressor 
 sly-u.5   101246965   uncharacterized LOC101246965 
 sly-u.5   101267198   uncharacterized LOC101267198 
 sot-r.1   102591286   dr1-associated corepressor 
 sot-r.1   102591894   dr1-associated corepressor-like 
 nta-r.1   107759614   uncharacterized LOC107759614 
 nta-r.1   107762185   uncharacterized LOC107762185 
 nta-r.1   107770898   uncharacterized LOC107770898 
 osa-u.5   4350685   dr1-associated corepressor 
 osa-u.5   4339189   uncharacterized LOC4339189 
 zma-u.5   541965   CCAAT-HAP5-transcription factor 59 
 zma-u.5   100304013   repressor protein 
 zma-u.5   100284240   dr1-associated corepressor 
 tae-r.2   123097335   dr1-associated corepressor 
 tae-r.2   123182454   dr1-associated corepressor homolog 
 tae-r.2   123060786   dr1-associated corepressor homolog 
 hvu-r.1   123443976   transcription regulator complex subunit bur6-like 
 hvu-r.1   123448437   dr1-associated corepressor-like 
 sbi-r.1   8057006   dr1-associated corepressor 
 sbi-r.1   8077043   dr1-associated corepressor homolog 
 bdi-r.1   100835219   dr1-associated corepressor 
 bdi-r.1   100823511   dr1-associated corepressor 
 cre-r.1   CHLRE_16g680050v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G19490 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G19490 (ath-m.4.lig coexpression data)

CoexMap"832069"


athAT5G19490 | Entrez gene ID : 832069      
Species ath bra ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bna
Paralog 7 3 3 1 3 2 2 3 2 2 3 2 3 3 2 2 2 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_197450.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  plas 1,  golg 1,  chlo_mito 1,  golg_plas 1  (predict for NP_197450.2)
Subcellular
localization
TargetP
other 6,  mito 5  (predict for NP_197450.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT5G19490
ath-m.9
for
AT5G19490
ath-m.4.bio
for
AT5G19490
ath-m.4.hor
for
AT5G19490
ath-m.4.str
for
AT5G19490
ath-m.4.tis
for
AT5G19490
ath-u.5
for
NF-YC11
bra-r.6
for
103851275
bra-r.6
for
103859444
bra-r.6
for
103845524
ghi-r.1
for
107963203
ghi-r.1
for
107959275
ghi-r.1
for
107928025
cit-r.1
for
102618305
gma-u.5
for
100801593
gma-u.5
for
100779786
gma-u.5
for
100810093
vvi-u.5
for
100255768
vvi-u.5
for
100253016
ppo-u.5
for
7460270
ppo-u.5
for
7455795
mtr-u.5
for
25488573
mtr-u.5
for
11430503
mtr-u.5
for
11424560
sly-u.5
for
101246965
sly-u.5
for
101267198
sot-r.1
for
102591286
sot-r.1
for
102591894
nta-r.1
for
107759614
nta-r.1
for
107762185
nta-r.1
for
107770898
osa-u.5
for
4350685
osa-u.5
for
4339189
zma-u.5
for
541965
zma-u.5
for
100304013
zma-u.5
for
100284240
tae-r.2
for
123097335
tae-r.2
for
123182454
tae-r.2
for
123060786
hvu-r.1
for
123443976
hvu-r.1
for
123448437
sbi-r.1
for
8057006
sbi-r.1
for
8077043
bdi-r.1
for
100835219
bdi-r.1
for
100823511
cre-r.1
for
CHLRE_16g680050v5


Ortholog ID: 2466
Species ath bra bra bra bna bna ghi ghi ghi cit gma gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol NF-YC11 LOC103851275 LOC103845524 LOC103847094 LOC106397272 LOC106446099 LOC107963203 LOC107927594 LOC121229689 LOC102618305 LOC100801593 LOC100779786 LOC100810093 LOC100255768 LOC100253016 LOC7460270 LOC7455795 LOC25488573 LOC11430503 LOC11424560 LOC101246965 LOC101267198 LOC102591286 LOC102591894 LOC107762185 LOC107770898 LOC107803601 LOC4350685 LOC4339189 LOC541965 LOC100304013 LOC100284240 LOC123060786 LOC123137895 LOC123092082 LOC123443976 LOC123448437 LOC8057006 LOC8077043 LOC100835219 LOC100823511 CHLRE_16g680050v5
Function* nuclear factor Y, subunit C11 dr1-associated corepressor dr1-associated corepressor dr1-associated corepressor homolog dr1-associated corepressor dr1-associated corepressor homolog uncharacterized LOC107963203 dr1-associated corepressor homolog dr1-associated corepressor homolog uncharacterized LOC102618305 class 2 transcription repressor NC2 alpha 6 class 2 transcription repressor NC2 alpha 5 class 2 transcription repressor NC2 alpha 3 transcription regulator complex subunit bur6 uncharacterized LOC100253016 uncharacterized LOC7460270 uncharacterized LOC7455795 dr1-associated corepressor homolog dr1-associated corepressor homolog dr1-associated corepressor uncharacterized LOC101246965 uncharacterized LOC101267198 dr1-associated corepressor dr1-associated corepressor-like uncharacterized LOC107762185 uncharacterized LOC107770898 uncharacterized LOC107803601 dr1-associated corepressor uncharacterized LOC4339189 CCAAT-HAP5-transcription factor 59 repressor protein dr1-associated corepressor dr1-associated corepressor homolog dr1-associated corepressor homolog uncharacterized LOC123092082 transcription regulator complex subunit bur6-like dr1-associated corepressor-like dr1-associated corepressor dr1-associated corepressor homolog dr1-associated corepressor dr1-associated corepressor uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03013 Nucleocytoplasmic transport 2
bna03015 mRNA surveillance pathway 2
bna03082 ATP-dependent chromatin remodeling 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03015 mRNA surveillance pathway 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma04136 Autophagy - other 2
gma04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 3
tae00564 Glycerophospholipid metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi04120 Ubiquitin mediated proteolysis 2
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 2
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820427 103851275 103845524 103847094 106397272 106446099 107963203 107927594 121229689 102618305 100801593 100779786 100810093 100255768 100253016 7460270 7455795 25488573 11430503 11424560 101246965 101267198 102591286 102591894 107762185 107770898 107803601 4350685 4339189 541965 100304013 100284240 123060786 123137895 123092082 123443976 123448437 8057006 8077043 100835219 100823511 5721548
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