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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT5G20580   TMEM192 family protein 
 ath-u.5   AT5G20580   TMEM192 family protein 
 ath-r.7   AT5G20580   TMEM192 family protein 
 ath-m.9   AT5G20580   TMEM192 family protein 
 ath-e.2   AT5G20580   TMEM192 family protein 
 ath-m.4.bio   AT5G20580   TMEM192 family protein 
 ath-m.4.hor   AT5G20580   TMEM192 family protein 
 ath-m.4.str   AT5G20580   TMEM192 family protein 
 ath-m.4.tis   AT5G20580   TMEM192 family protein 
 ath-u.5   FIP1   FRIGIDA interacting protein 1 
 bra-r.6   103856453   protein FIP1 
 bra-r.6   103828503   protein FIP1 
 bna-r.1   106434858   protein FIP1 
 bna-r.1   106357746   protein FIP1 
 bna-r.1   106387000   protein FIP1-like 
 ghi-r.1   121225191   protein FIP1 
 ghi-r.1   107893360   protein FIP1 
 cit-r.1   102614822   hypothetical protein 
 gma-u.5   100810116   protein FIP1 
 gma-u.5   100795952   protein FIP1 
 vvi-u.5   109121383   protein FIP1 
 ppo-u.5   112324960   protein FIP1 
 mtr-u.5   25486512   protein FIP1 
 sly-u.5   101249332   protein FIP1 
 sot-r.1   102597756   uncharacterized LOC102597756 
 sot-r.1   102606263   uncharacterized LOC102606263 
 nta-r.1   107824014   protein FIP1 
 nta-r.1   107784769   protein FIP1-like 
 nta-r.1   107823209   protein FIP1 
 osa-u.5   4330909   protein FIP1 
 zma-u.5   100276172   uncharacterized LOC100276172 
 tae-r.2   123128612   protein FIP1 
 tae-r.2   123138491   protein FIP1 
 tae-r.2   123164112   protein FIP1 
 hvu-r.1   123407219   protein FIP1-like 
 hvu-r.1   123401192   protein FIP1-like 
 hvu-r.1   123407222   protein FIP1-like 
 sbi-r.1   8082675   uncharacterized LOC8082675 
 bdi-r.1   100833978   uncharacterized LOC100833978 
 bdi-r.1   100843973   uncharacterized LOC100843973 

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Top 50 coexpressed genes to AT5G20580 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G20580 (ath-m.4.lig coexpression data)

CoexMap"832180"


athAT5G20580 | Entrez gene ID : 832180      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 2 1 2 1 1 1 1 2 3 1 1 3 3 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_197558.2 [sequence] [blastp]
NP_974816.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  vacu 4,  E.R. 1,  mito 1,  extr 1,  cyto_E.R. 1  (predict for NP_197558.2)
plas 4,  vacu 4,  cyto 1,  mito 1,  extr 1,  E.R. 1,  cyto_E.R. 1  (predict for NP_974816.1)
Subcellular
localization
TargetP
other 9  (predict for NP_197558.2)
other 9  (predict for NP_974816.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT5G20580
ath-u.5
for
AT5G20580
ath-r.7
for
AT5G20580
ath-m.9
for
AT5G20580
ath-e.2
for
AT5G20580
ath-m.4.bio
for
AT5G20580
ath-m.4.hor
for
AT5G20580
ath-m.4.str
for
AT5G20580
ath-m.4.tis
for
AT5G20580
ath-u.5
for
FIP1
bra-r.6
for
103856453
bra-r.6
for
103828503
bna-r.1
for
106434858
bna-r.1
for
106357746
bna-r.1
for
106387000
ghi-r.1
for
121225191
ghi-r.1
for
107893360
cit-r.1
for
102614822
gma-u.5
for
100810116
gma-u.5
for
100795952
vvi-u.5
for
109121383
ppo-u.5
for
112324960
mtr-u.5
for
25486512
sly-u.5
for
101249332
sot-r.1
for
102597756
sot-r.1
for
102606263
nta-r.1
for
107824014
nta-r.1
for
107784769
nta-r.1
for
107823209
osa-u.5
for
4330909
zma-u.5
for
100276172
tae-r.2
for
123128612
tae-r.2
for
123138491
tae-r.2
for
123164112
hvu-r.1
for
123407219
hvu-r.1
for
123401192
hvu-r.1
for
123407222
sbi-r.1
for
8082675
bdi-r.1
for
100833978
bdi-r.1
for
100843973


Ortholog ID: 5456
Species ath ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot sot nta nta nta osa zma tae tae tae hvu hvu hvu sbi bdi bdi
Symbol AT5G20580 FIP1 LOC103856453 LOC103828503 LOC106434858 LOC106387000 LOC106411481 LOC121225191 LOC107893360 LOC102614822 LOC100810116 LOC100795952 LOC109121383 LOC112324960 LOC25486512 LOC101249332 LOC102597756 LOC102606263 LOC107784769 LOC107823209 LOC107765101 LOC4330909 LOC100276172 LOC123128612 LOC123145745 LOC123156351 LOC123407219 LOC123401192 LOC123407222 LOC8082675 LOC100833978 LOC100843973
Function* TMEM192 family protein FRIGIDA interacting protein 1 protein FIP1 protein FIP1 protein FIP1 protein FIP1-like protein FIP1 protein FIP1 protein FIP1 hypothetical protein protein FIP1 protein FIP1 protein FIP1 protein FIP1 protein FIP1 protein FIP1 uncharacterized LOC102597756 uncharacterized LOC102606263 protein FIP1-like protein FIP1 protein FIP1 protein FIP1 uncharacterized LOC100276172 protein FIP1 protein FIP1 protein FIP1 protein FIP1-like protein FIP1-like protein FIP1-like uncharacterized LOC8082675 uncharacterized LOC100833978 uncharacterized LOC100843973
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03430 Mismatch repair 2
bra03013 Nucleocytoplasmic transport 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00051 Fructose and mannose metabolism 4
bna03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 5
bna04145 Phagosome 5
bna04148 Efferocytosis 5
bna00600 Sphingolipid metabolism 2
bna04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 4
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00260 Glycine, serine and threonine metabolism 2
sot00470 D-Amino acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00460 Cyanoamino acid metabolism 2
nta00500 Starch and sucrose metabolism 2
nta00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04142 Lysosome 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 3
tae04144 Endocytosis 2
tae04145 Phagosome 2
tae04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832180 815154 103856453 103828503 106434858 106387000 106411481 121225191 107893360 102614822 100810116 100795952 109121383 112324960 25486512 101249332 102597756 102606263 107784769 107823209 107765101 4330909 100276172 123128612 123145745 123156351 123407219 123401192 123407222 8082675 100833978 100843973
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