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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT5G27820   Ribosomal L18p/L5e family protein 
 ath-u.5   AT5G27820   Ribosomal L18p/L5e family protein 
 ath-r.7   AT5G27820   Ribosomal L18p/L5e family protein 
 ath-m.9   AT5G27820   Ribosomal L18p/L5e family protein 
 ath-e.2   AT5G27820   Ribosomal L18p/L5e family protein 
 ath-m.4.bio   AT5G27820   Ribosomal L18p/L5e family protein 
 ath-m.4.hor   AT5G27820   Ribosomal L18p/L5e family protein 
 ath-m.4.str   AT5G27820   Ribosomal L18p/L5e family protein 
 ath-m.4.tis   AT5G27820   Ribosomal L18p/L5e family protein 
 bra-r.6   103874510   50S ribosomal protein L18 
 bra-r.6   103854674   50S ribosomal protein L18 
 bna-r.1   111206110   50S ribosomal protein L18-like 
 bna-r.1   111203406   50S ribosomal protein L18-like 
 bna-r.1   125600800   50S ribosomal protein L18-like 
 ghi-r.1   107899085   50S ribosomal protein L18 
 ghi-r.1   107894184   50S ribosomal protein L18 
 cit-r.1   102620329   uncharacterized LOC102620329 
 gma-u.5   100775333   50S ribosomal protein L18 
 gma-u.5   100526952   ribosomal L18/L5e 
 vvi-u.5   100251051   uncharacterized LOC100251051 
 ppo-u.5   7490177   uncharacterized LOC7490177 
 mtr-u.5   11445003   50S ribosomal protein L18 
 sly-u.5   101261135   uncharacterized LOC101261135 
 sot-r.1   102598083   50S ribosomal protein L18 
 nta-r.1   107769777   uncharacterized LOC107769777 
 nta-r.1   107795346   uncharacterized LOC107795346 
 osa-u.5   4327720   uncharacterized LOC4327720 
 osa-u.5   4333798   uncharacterized LOC4333798 
 zma-u.5   100283952   50S ribosomal protein L18 
 zma-u.5   100285345   Ribosomal L18p/L5e family protein 
 tae-r.2   123060981   50S ribosomal protein L18 
 tae-r.2   123078055   50S ribosomal protein L18 
 hvu-r.1   123443404   50S ribosomal protein L18 
 hvu-r.1   123447253   50S ribosomal protein L18-like 
 sbi-r.1   8083396   50S ribosomal protein L18 
 sbi-r.1   8054134   50S ribosomal protein L18 
 bdi-r.1   100834269   50S ribosomal protein L18 
 bdi-r.1   100826749   50S ribosomal protein L18 

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Top 50 coexpressed genes to AT5G27820 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G27820 (ath-m.4.lig coexpression data)

CoexMap"832844"


athAT5G27820 | Entrez gene ID : 832844      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 2 1 1 1 1 1 2 2 2 2 2 2 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006412 [list] [network] translation  (926 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_198134.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  mito 4,  chlo 1,  nucl 1,  cysk_nucl 1  (predict for NP_198134.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for NP_198134.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT5G27820
ath-u.5
for
AT5G27820
ath-r.7
for
AT5G27820
ath-m.9
for
AT5G27820
ath-e.2
for
AT5G27820
ath-m.4.bio
for
AT5G27820
ath-m.4.hor
for
AT5G27820
ath-m.4.str
for
AT5G27820
ath-m.4.tis
for
AT5G27820
bra-r.6
for
103874510
bra-r.6
for
103854674
bna-r.1
for
111206110
bna-r.1
for
111203406
bna-r.1
for
125600800
ghi-r.1
for
107899085
ghi-r.1
for
107894184
cit-r.1
for
102620329
gma-u.5
for
100775333
gma-u.5
for
100526952
vvi-u.5
for
100251051
ppo-u.5
for
7490177
mtr-u.5
for
11445003
sly-u.5
for
101261135
sot-r.1
for
102598083
nta-r.1
for
107769777
nta-r.1
for
107795346
osa-u.5
for
4327720
osa-u.5
for
4333798
zma-u.5
for
100283952
zma-u.5
for
100285345
tae-r.2
for
123060981
tae-r.2
for
123078055
hvu-r.1
for
123443404
hvu-r.1
for
123447253
sbi-r.1
for
8083396
sbi-r.1
for
8054134
bdi-r.1
for
100834269
bdi-r.1
for
100826749


Ortholog ID: 5586
Species ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi
Symbol AT5G27820 LOC103874510 LOC103854674 LOC111203406 LOC125600800 LOC106410542 LOC107899085 LOC107894184 LOC102620329 LOC100775333 LOC100526952 LOC100251051 LOC7490177 LOC11445003 LOC101261135 LOC102598083 LOC107769777 LOC107795346 LOC4327720 LOC4333798 LOC100283952 LOC100285345 LOC123078055 LOC123090756 LOC123443404 LOC123447253 LOC8083396 LOC8054134 LOC100834269 LOC100826749
Function* Ribosomal L18p/L5e family protein 50S ribosomal protein L18 50S ribosomal protein L18 50S ribosomal protein L18-like 50S ribosomal protein L18-like 50S ribosomal protein L18-like 50S ribosomal protein L18 50S ribosomal protein L18 uncharacterized LOC102620329 50S ribosomal protein L18 ribosomal L18/L5e uncharacterized LOC100251051 uncharacterized LOC7490177 50S ribosomal protein L18 uncharacterized LOC101261135 50S ribosomal protein L18 uncharacterized LOC107769777 uncharacterized LOC107795346 uncharacterized LOC4327720 uncharacterized LOC4333798 50S ribosomal protein L18 Ribosomal L18p/L5e family protein 50S ribosomal protein L18 50S ribosomal protein L18 50S ribosomal protein L18 50S ribosomal protein L18-like 50S ribosomal protein L18 50S ribosomal protein L18 50S ribosomal protein L18 50S ribosomal protein L18
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 3
bra03082 ATP-dependent chromatin remodeling 2
bra03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi03040 Spliceosome 5
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 6
ghi03040 Spliceosome 5
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma03040 Spliceosome 3
gma00190 Oxidative phosphorylation 2
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 11
sly00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03083 Polycomb repressive complex 3
sot04120 Ubiquitin mediated proteolysis 3
sot04141 Protein processing in endoplasmic reticulum 3
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 9
osa00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 4
tae03008 Ribosome biogenesis in eukaryotes 4
tae03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
sbi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 4
bdi03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 832844 103874510 103854674 111203406 125600800 106410542 107899085 107894184 102620329 100775333 100526952 100251051 7490177 11445003 101261135 102598083 107769777 107795346 4327720 4333798 100283952 100285345 123078055 123090756 123443404 123447253 8083396 8054134 100834269 100826749
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