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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT5G49390   serine/threonine-protein phosphatase 4 regulatory subunit-like protein 
 ath-u.5   AT5G49390   serine/threonine-protein phosphatase 4 regulatory subunit-like protein 
 ath-r.7   AT5G49390   serine/threonine-protein phosphatase 4 regulatory subunit-like protein 
 ath-m.9   AT5G49390   serine/threonine-protein phosphatase 4 regulatory subunit-like protein 
 ath-e.2   AT5G49390   serine/threonine-protein phosphatase 4 regulatory subunit-like protein 
 ath-m.4.bio   AT5G49390   serine/threonine-protein phosphatase 4 regulatory subunit-like protein 
 ath-m.4.hor   AT5G49390   serine/threonine-protein phosphatase 4 regulatory subunit-like protein 
 ath-m.4.str   AT5G49390   serine/threonine-protein phosphatase 4 regulatory subunit-like protein 
 ath-m.4.tis   AT5G49390   serine/threonine-protein phosphatase 4 regulatory subunit-like protein 
 ath-u.5   AT3G06670   binding protein 
 bra-r.6   103849737   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 bra-r.6   103859175   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 bra-r.6   103870724   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 bna-r.1   125602542   serine/threonine-protein phosphatase 4 regulatory subunit 3-like 
 bna-r.1   106452984   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 bna-r.1   106400534   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 ghi-r.1   107908499   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 ghi-r.1   107916201   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 ghi-r.1   107926476   serine/threonine-protein phosphatase 4 regulatory subunit 3A 
 cit-r.1   102624367   uncharacterized LOC102624367 
 gma-u.5   100786790   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 gma-u.5   100775758   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 gma-u.5   100808669   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 vvi-u.5   100241492   uncharacterized LOC100241492 
 ppo-u.5   7485913   uncharacterized LOC7485913 
 ppo-u.5   7482268   uncharacterized LOC7482268 
 mtr-u.5   11422056   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 mtr-u.5   11415143   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 sly-u.5   101266318   uncharacterized LOC101266318 
 sly-u.5   101260566   uncharacterized LOC101260566 
 sot-r.1   102602525   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 sot-r.1   102583086   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 nta-r.1   107829856   uncharacterized LOC107829856 
 nta-r.1   107766687   uncharacterized LOC107766687 
 osa-u.5   4337863   uncharacterized LOC4337863 
 osa-u.5   4326847   uncharacterized LOC4326847 
 zma-u.5   100502168   uncharacterized LOC100502168 
 zma-u.5   103650148   serine/threonine-protein phosphatase 4 regulatory subunit 3B 
 tae-r.2   123061237   serine/threonine-protein phosphatase 4 regulatory subunit 3B 
 tae-r.2   123069818   serine/threonine-protein phosphatase 4 regulatory subunit 3B 
 tae-r.2   123078368   serine/threonine-protein phosphatase 4 regulatory subunit 3B 
 hvu-r.1   123443640   serine/threonine-protein phosphatase 4 regulatory subunit 3B 
 sbi-r.1   8086323   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 bdi-r.1   100842638   serine/threonine-protein phosphatase 4 regulatory subunit 3 
 cre-r.1   CHLRE_17g701300v5   uncharacterized protein 

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Top 50 coexpressed genes to AT5G49390 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G49390 (ath-m.4.lig coexpression data)

CoexMap"834999"


athAT5G49390 | Entrez gene ID : 834999      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 3 3 3 1 3 1 2 2 2 2 2 2 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0019888 [list] [network] protein phosphatase regulator activity  (29 genes)  IEA  
Protein NP_001318767.1 [sequence] [blastp]
NP_001331637.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  chlo_mito 4,  nucl 3,  mito 2  (predict for NP_001318767.1)
mito 3,  nucl 3,  cyto_mito 2,  plas 1,  chlo 1,  cyto_nucl 1,  cysk_nucl 1,  golg_plas 1  (predict for NP_001331637.1)
Subcellular
localization
TargetP
other 7,  mito 6  (predict for NP_001318767.1)
other 7,  mito 6  (predict for NP_001331637.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT5G49390
ath-u.5
for
AT5G49390
ath-r.7
for
AT5G49390
ath-m.9
for
AT5G49390
ath-e.2
for
AT5G49390
ath-m.4.bio
for
AT5G49390
ath-m.4.hor
for
AT5G49390
ath-m.4.str
for
AT5G49390
ath-m.4.tis
for
AT5G49390
ath-u.5
for
AT3G06670
bra-r.6
for
103849737
bra-r.6
for
103859175
bra-r.6
for
103870724
bna-r.1
for
125602542
bna-r.1
for
106452984
bna-r.1
for
106400534
ghi-r.1
for
107908499
ghi-r.1
for
107916201
ghi-r.1
for
107926476
cit-r.1
for
102624367
gma-u.5
for
100786790
gma-u.5
for
100775758
gma-u.5
for
100808669
vvi-u.5
for
100241492
ppo-u.5
for
7485913
ppo-u.5
for
7482268
mtr-u.5
for
11422056
mtr-u.5
for
11415143
sly-u.5
for
101266318
sly-u.5
for
101260566
sot-r.1
for
102602525
sot-r.1
for
102583086
nta-r.1
for
107829856
nta-r.1
for
107766687
osa-u.5
for
4337863
osa-u.5
for
4326847
zma-u.5
for
100502168
zma-u.5
for
103650148
tae-r.2
for
123061237
tae-r.2
for
123069818
tae-r.2
for
123078368
hvu-r.1
for
123443640
sbi-r.1
for
8086323
bdi-r.1
for
100842638
cre-r.1
for
CHLRE_17g701300v5


Ortholog ID: 4070
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae tae hvu sbi bdi cre
Symbol AT5G49390 AT3G06670 LOC103849737 LOC103859175 LOC103870724 LOC106400534 LOC106389041 LOC106346092 LOC107930129 LOC107938663 LOC107896621 LOC102624367 LOC100786790 LOC100775758 LOC100802657 LOC100241492 LOC7485913 LOC7482268 LOC11422056 LOC11415143 LOC101266318 LOC101260566 LOC102602525 LOC102583086 LOC107829856 LOC107766687 LOC4337863 LOC4326847 LOC100502168 LOC103650148 LOC123061237 LOC123069818 LOC123078368 LOC123443640 LOC8086323 LOC100842638 CHLRE_17g701300v5
Function* serine/threonine-protein phosphatase 4 regulatory subunit-like protein binding protein serine/threonine-protein phosphatase 4 regulatory subunit 3 serine/threonine-protein phosphatase 4 regulatory subunit 3 serine/threonine-protein phosphatase 4 regulatory subunit 3 serine/threonine-protein phosphatase 4 regulatory subunit 3 serine/threonine-protein phosphatase 4 regulatory subunit 3-like serine/threonine-protein phosphatase 4 regulatory subunit 3-like serine/threonine-protein phosphatase 4 regulatory subunit 3 serine/threonine-protein phosphatase 4 regulatory subunit 3 serine/threonine-protein phosphatase 4 regulatory subunit 3 uncharacterized LOC102624367 serine/threonine-protein phosphatase 4 regulatory subunit 3 serine/threonine-protein phosphatase 4 regulatory subunit 3 serine/threonine-protein phosphatase 4 regulatory subunit 3A uncharacterized LOC100241492 uncharacterized LOC7485913 uncharacterized LOC7482268 serine/threonine-protein phosphatase 4 regulatory subunit 3 serine/threonine-protein phosphatase 4 regulatory subunit 3 uncharacterized LOC101266318 uncharacterized LOC101260566 serine/threonine-protein phosphatase 4 regulatory subunit 3 serine/threonine-protein phosphatase 4 regulatory subunit 3 uncharacterized LOC107829856 uncharacterized LOC107766687 uncharacterized LOC4337863 uncharacterized LOC4326847 uncharacterized LOC100502168 serine/threonine-protein phosphatase 4 regulatory subunit 3B serine/threonine-protein phosphatase 4 regulatory subunit 3B serine/threonine-protein phosphatase 4 regulatory subunit 3B serine/threonine-protein phosphatase 4 regulatory subunit 3B serine/threonine-protein phosphatase 4 regulatory subunit 3B serine/threonine-protein phosphatase 4 regulatory subunit 3 serine/threonine-protein phosphatase 4 regulatory subunit 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
ath03015 mRNA surveillance pathway 2
ath00562 Inositol phosphate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 2
bna00562 Inositol phosphate metabolism 2
bna04070 Phosphatidylinositol signaling system 2
bna03022 Basal transcription factors 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 2
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03015 mRNA surveillance pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03018 RNA degradation 2
sly03015 mRNA surveillance pathway 2
sly04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 5
osa03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 3
zma03040 Spliceosome 3
zma03015 mRNA surveillance pathway 2
zma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae04382 Cornified envelope formation 3
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834999 819852 103849737 103859175 103870724 106400534 106389041 106346092 107930129 107938663 107896621 102624367 100786790 100775758 100802657 100241492 7485913 7482268 11422056 11415143 101266318 101260566 102602525 102583086 107829856 107766687 4337863 4326847 100502168 103650148 123061237 123069818 123078368 123443640 8086323 100842638 5717297
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