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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   IAA9   indole-3-acetic acid inducible 9 
 ath-u.5   IAA9   indole-3-acetic acid inducible 9 
 ath-r.7   IAA9   indole-3-acetic acid inducible 9 
 ath-m.9   IAA9   indole-3-acetic acid inducible 9 
 ath-e.2   IAA9   indole-3-acetic acid inducible 9 
 ath-m.4.bio   IAA9   indole-3-acetic acid inducible 9 
 ath-m.4.hor   IAA9   indole-3-acetic acid inducible 9 
 ath-m.4.str   IAA9   indole-3-acetic acid inducible 9 
 ath-m.4.tis   IAA9   indole-3-acetic acid inducible 9 
 ath-u.5   IAA8   indoleacetic acid-induced protein 8 
 bra-r.6   103864374   auxin-responsive protein IAA8 
 bra-r.6   103855311   auxin-responsive protein IAA9 
 bra-r.6   103837589   auxin-responsive protein IAA9 
 bna-r.1   106415790   auxin-responsive protein IAA9 
 bna-r.1   106415765   auxin-responsive protein IAA9-like 
 ghi-r.1   121230297   auxin-responsive protein IAA9 
 ghi-r.1   107905200   auxin-responsive protein IAA8 
 ghi-r.1   107914352   auxin-responsive protein IAA9 
 cit-r.1   102624962   auxin-responsive protein IAA8-like 
 cit-r.1   102627489   auxin-responsive protein IAA9 
 gma-u.5   100785203   auxin-responsive protein IAA8 
 gma-u.5   100818881   auxin-responsive protein IAA9 
 gma-u.5   100815447   auxin-responsive protein IAA9 
 vvi-u.5   100232909   Aux/IAA protein 
 ppo-u.5   7461832   auxin-responsive protein IAA9 
 mtr-u.5   11409351   auxin-responsive protein IAA8 
 mtr-u.5   11428247   auxin-responsive protein IAA9 
 mtr-u.5   11433988   auxin-responsive protein IAA8 
 sly-u.5   IAA9   auxin-responsive protein IAA9 
 sot-r.1   102577658   Aux/IAA protein 
 nta-r.1   107763299   auxin-responsive protein IAA8-like 
 nta-r.1   107788572   auxin-responsive protein IAA8-like 

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Top 50 coexpressed genes to IAA9 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to IAA9 (ath-m.4.lig coexpression data)

CoexMap"836693"


athIAA9 | Entrez gene ID : 836693      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta hvu tae sbi zma cre osa bdi
Paralog 10 3 2 3 2 3 1 1 3 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04075 [list] [network] Plant hormone signal transduction (433 genes)
GO BP
GO:0009734 [list] [network] auxin-activated signaling pathway  (65 genes)  TAS  
GO:0009733 [list] [network] response to auxin  (344 genes)  TAS  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM ISS  
GO MF
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001318885.1 [sequence] [blastp]
NP_851275.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  chlo 1,  cyto 1,  pero 1,  chlo_mito 1,  cyto_pero 1  (predict for NP_001318885.1)
nucl 8,  chlo 1,  cyto 1,  mito 1,  chlo_mito 1  (predict for NP_851275.1)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for NP_001318885.1)
chlo 7,  other 4  (predict for NP_851275.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
IAA9
ath-u.5
for
IAA9
ath-r.7
for
IAA9
ath-m.9
for
IAA9
ath-e.2
for
IAA9
ath-m.4.bio
for
IAA9
ath-m.4.hor
for
IAA9
ath-m.4.str
for
IAA9
ath-m.4.tis
for
IAA9
ath-u.5
for
IAA8
bra-r.6
for
103864374
bra-r.6
for
103855311
bra-r.6
for
103837589
bna-r.1
for
106415790
bna-r.1
for
106415765
ghi-r.1
for
121230297
ghi-r.1
for
107905200
ghi-r.1
for
107914352
cit-r.1
for
102624962
cit-r.1
for
102627489
gma-u.5
for
100785203
gma-u.5
for
100818881
gma-u.5
for
100815447
vvi-u.5
for
100232909
ppo-u.5
for
7461832
mtr-u.5
for
11409351
mtr-u.5
for
11428247
mtr-u.5
for
11433988
sly-u.5
for
IAA9
sot-r.1
for
102577658
nta-r.1
for
107763299
nta-r.1
for
107788572


Ortholog ID: 4518
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi ppo mtr mtr mtr sly sot nta nta
Symbol IAA9 IAA8 LOC103864374 LOC103855311 LOC103837589 LOC106347820 LOC106392106 LOC106441245 LOC107914352 LOC107957855 LOC107950498 LOC102624962 LOC102627489 LOC100785203 LOC100815447 LOC100789251 LOC100232909 LOC7461832 LOC11409351 LOC11428247 LOC11433988 IAA9 LOC102577658 LOC107763299 LOC107788572
Function* indole-3-acetic acid inducible 9 indoleacetic acid-induced protein 8 auxin-responsive protein IAA8 auxin-responsive protein IAA9 auxin-responsive protein IAA9 auxin-responsive protein IAA9 auxin-responsive protein IAA8-like auxin-responsive protein IAA9 auxin-responsive protein IAA9 auxin-responsive protein IAA8 auxin-responsive protein IAA9 auxin-responsive protein IAA8-like auxin-responsive protein IAA9 auxin-responsive protein IAA8 auxin-responsive protein IAA9 auxin-responsive protein IAA9 Aux/IAA protein auxin-responsive protein IAA9 auxin-responsive protein IAA8 auxin-responsive protein IAA9 auxin-responsive protein IAA8 auxin-responsive protein IAA9 Aux/IAA protein auxin-responsive protein IAA8-like auxin-responsive protein IAA8-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 10
ath00270 Cysteine and methionine metabolism 2
ath04016 MAPK signaling pathway - plant 2
ath04070 Phosphatidylinositol signaling system 2
ath04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 6
gma04626 Plant-pathogen interaction 4
gma04120 Ubiquitin mediated proteolysis 2
gma00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
gma04517 IgSF CAM signaling 2
gma04814 Motor proteins 2
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 4
sly00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
sot04712 Circadian rhythm - plant 2
sot03082 ATP-dependent chromatin remodeling 2
sot04075 Plant hormone signal transduction 2
sot03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 3
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00051 Fructose and mannose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 836693 816798 103864374 103855311 103837589 106347820 106392106 106441245 107914352 107957855 107950498 102624962 102627489 100785203 100815447 100789251 100232909 7461832 11409351 11428247 11433988 543750 102577658 107763299 107788572
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