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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT1G06550   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 ath-u.5   AT1G06550   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 ath-r.7   AT1G06550   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 ath-m.9   AT1G06550   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 ath-e.2   AT1G06550   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 ath-m.4.bio   AT1G06550   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 ath-m.4.hor   AT1G06550   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 ath-m.4.str   AT1G06550   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 ath-m.4.tis   AT1G06550   ATP-dependent caseinolytic (Clp) protease/crotonase family protein 
 bra-r.6   103836475   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 bna-r.1   125591411   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 bna-r.1   106362215   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 bna-r.1   106359388   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 ghi-r.1   107924736   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 ghi-r.1   107912664   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 cit-r.1   102617592   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 gma-u.5   100811550   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 gma-u.5   100818188   3-hydroxyisobutyryl-CoA hydrolase-like protein 
 vvi-u.5   100266026   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 ppo-u.5   7468727   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 mtr-u.5   25488912   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 sot-r.1   102580445   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 nta-r.1   107814728   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 nta-r.1   107771448   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 nta-r.1   107776974   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 osa-u.5   4324637   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 zma-u.5   100283920   3-hydroxyisobutyryl-CoA hydrolase/ catalytic 
 tae-r.2   123062071   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 tae-r.2   123070795   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 tae-r.2   123079184   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 hvu-r.1   123444422   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 sbi-r.1   8072081   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 
 bdi-r.1   100825286   3-hydroxyisobutyryl-CoA hydrolase-like protein 5 

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Top 50 coexpressed genes to AT1G06550 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G06550 (ath-m.4.lig coexpression data)

CoexMap"837166"


athAT1G06550 | Entrez gene ID : 837166      
Species ath bra bna ghi cit gma vvi ppo mtr sot nta osa zma tae hvu sbi bdi cre sly
Paralog 9 1 3 2 1 2 1 1 1 1 3 1 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath00280 [list] [network] Valine, leucine and isoleucine degradation (52 genes)
ath00410 [list] [network] beta-Alanine metabolism (47 genes)
ath00640 [list] [network] Propanoate metabolism (42 genes)
ath01200 [list] [network] Carbon metabolism (275 genes)
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_172142.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cysk 3,  cyto 2,  nucl_plas 2  (predict for NP_172142.2)
Subcellular
localization
TargetP
other 9  (predict for NP_172142.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT1G06550
ath-u.5
for
AT1G06550
ath-r.7
for
AT1G06550
ath-m.9
for
AT1G06550
ath-e.2
for
AT1G06550
ath-m.4.bio
for
AT1G06550
ath-m.4.hor
for
AT1G06550
ath-m.4.str
for
AT1G06550
ath-m.4.tis
for
AT1G06550
bra-r.6
for
103836475
bna-r.1
for
125591411
bna-r.1
for
106362215
bna-r.1
for
106359388
ghi-r.1
for
107924736
ghi-r.1
for
107912664
cit-r.1
for
102617592
gma-u.5
for
100811550
gma-u.5
for
100818188
vvi-u.5
for
100266026
ppo-u.5
for
7468727
mtr-u.5
for
25488912
sot-r.1
for
102580445
nta-r.1
for
107814728
nta-r.1
for
107771448
nta-r.1
for
107776974
osa-u.5
for
4324637
zma-u.5
for
100283920
tae-r.2
for
123062071
tae-r.2
for
123070795
tae-r.2
for
123079184
hvu-r.1
for
123444422
sbi-r.1
for
8072081
bdi-r.1
for
100825286


Ortholog ID: 5609
Species ath bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi
Symbol AT1G06550 LOC103836475 LOC125591411 LOC106362215 LOC106359388 LOC107924736 LOC107912664 LOC102617592 LOC100811550 LOC100818188 LOC100266026 LOC7468727 LOC25488912 LOC101263879 LOC102580445 LOC107814728 LOC107771448 LOC107776974 LOC4324637 LOC100283920 LOC123062071 LOC123070795 LOC123079184 LOC123444422 LOC8072081 LOC100825286
Function* ATP-dependent caseinolytic (Clp) protease/crotonase family protein 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase/ catalytic 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5 3-hydroxyisobutyryl-CoA hydrolase-like protein 5
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01230 Biosynthesis of amino acids 8
ath00400 Phenylalanine, tyrosine and tryptophan biosynthesis 6
ath00940 Phenylpropanoid biosynthesis 6
ath00360 Phenylalanine metabolism 3
ath00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 4
bra01232 Nucleotide metabolism 2
bra01200 Carbon metabolism 2
bra00941 Flavonoid biosynthesis 2
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 10
bna00030 Pentose phosphate pathway 6
bna00480 Glutathione metabolism 6
bna00280 Valine, leucine and isoleucine degradation 4
bna00410 beta-Alanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 7
bna00520 Amino sugar and nucleotide sugar metabolism 4
bna00280 Valine, leucine and isoleucine degradation 4
bna00410 beta-Alanine metabolism 4
bna00640 Propanoate metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01200 Carbon metabolism 7
bna00280 Valine, leucine and isoleucine degradation 4
bna00410 beta-Alanine metabolism 4
bna00640 Propanoate metabolism 4
bna00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi01200 Carbon metabolism 5
ghi00280 Valine, leucine and isoleucine degradation 4
ghi00010 Glycolysis / Gluconeogenesis 3
ghi00260 Glycine, serine and threonine metabolism 3
ghi01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00280 Valine, leucine and isoleucine degradation 4
ghi01200 Carbon metabolism 4
ghi00410 beta-Alanine metabolism 2
ghi00640 Propanoate metabolism 2
ghi00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00940 Phenylpropanoid biosynthesis 3
cit00360 Phenylalanine metabolism 2
cit00670 One carbon pool by folate 2
cit00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 4
gma00640 Propanoate metabolism 3
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma00280 Valine, leucine and isoleucine degradation 2
gma00410 beta-Alanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00941 Flavonoid biosynthesis 3
gma00640 Propanoate metabolism 3
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 3
gma01240 Biosynthesis of cofactors 2
gma00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01230 Biosynthesis of amino acids 9
vvi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 7
vvi00010 Glycolysis / Gluconeogenesis 3
vvi01200 Carbon metabolism 3
vvi00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00941 Flavonoid biosynthesis 5
ppo00620 Pyruvate metabolism 3
ppo00640 Propanoate metabolism 3
ppo00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
ppo01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr01230 Biosynthesis of amino acids 5
mtr00400 Phenylalanine, tyrosine and tryptophan biosynthesis 4
mtr00020 Citrate cycle (TCA cycle) 2
mtr00071 Fatty acid degradation 2
mtr00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly01230 Biosynthesis of amino acids 7
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
sly01200 Carbon metabolism 3
sly00940 Phenylpropanoid biosynthesis 2
sly00010 Glycolysis / Gluconeogenesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 7
nta01240 Biosynthesis of cofactors 6
nta00350 Tyrosine metabolism 4
nta01230 Biosynthesis of amino acids 4
nta00670 One carbon pool by folate 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01200 Carbon metabolism 8
nta00670 One carbon pool by folate 4
nta00350 Tyrosine metabolism 4
nta01230 Biosynthesis of amino acids 4
nta01240 Biosynthesis of cofactors 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00940 Phenylpropanoid biosynthesis 8
osa01230 Biosynthesis of amino acids 6
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
osa00360 Phenylalanine metabolism 4
osa01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01230 Biosynthesis of amino acids 11
zma00400 Phenylalanine, tyrosine and tryptophan biosynthesis 10
zma01200 Carbon metabolism 2
zma00999 Biosynthesis of various plant secondary metabolites 2
zma00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01230 Biosynthesis of amino acids 11
tae00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
tae01200 Carbon metabolism 4
tae00280 Valine, leucine and isoleucine degradation 3
tae00410 beta-Alanine metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae01230 Biosynthesis of amino acids 4
tae00270 Cysteine and methionine metabolism 3
tae00450 Selenocompound metabolism 3
tae00010 Glycolysis / Gluconeogenesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 6
tae01230 Biosynthesis of amino acids 5
tae00270 Cysteine and methionine metabolism 3
tae00450 Selenocompound metabolism 3
tae00280 Valine, leucine and isoleucine degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 5
hvu00270 Cysteine and methionine metabolism 4
hvu00670 One carbon pool by folate 3
hvu01200 Carbon metabolism 3
hvu00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 8
sbi01230 Biosynthesis of amino acids 8
sbi00999 Biosynthesis of various plant secondary metabolites 2
sbi00350 Tyrosine metabolism 2
sbi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi01230 Biosynthesis of amino acids 9
bdi01200 Carbon metabolism 5
bdi00400 Phenylalanine, tyrosine and tryptophan biosynthesis 5
bdi00270 Cysteine and methionine metabolism 3
bdi00350 Tyrosine metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837166 103836475 125591411 106362215 106359388 107924736 107912664 102617592 100811550 100818188 100266026 7468727 25488912 101263879 102580445 107814728 107771448 107776974 4324637 100283920 123062071 123070795 123079184 123444422 8072081 100825286
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