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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   GXM3   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-m.9   GXM3   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-m.4.bio   GXM3   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-m.4.hor   GXM3   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-m.4.str   GXM3   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-m.4.tis   GXM3   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-u.5   GXM2   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 ath-u.5   GXMT1   glucuronoxylan 4-O-methyltransferase-like protein (DUF579) 
 bra-r.6   103836322   glucuronoxylan 4-O-methyltransferase 1 
 bra-r.6   103840048   glucuronoxylan 4-O-methyltransferase 3 
 bna-r.1   106345221   glucuronoxylan 4-O-methyltransferase 3 
 bna-r.1   111200262   glucuronoxylan 4-O-methyltransferase 3-like 
 ghi-r.1   107920526   glucuronoxylan 4-O-methyltransferase 3 
 ghi-r.1   107922172   glucuronoxylan 4-O-methyltransferase 1-like 
 ghi-r.1   107941340   glucuronoxylan 4-O-methyltransferase 1-like 
 cit-r.1   102615379   glucuronoxylan 4-O-methyltransferase 1 
 cit-r.1   102624610   glucuronoxylan 4-O-methyltransferase 3 
 gma-u.5   100812805   glucuronoxylan 4-O-methyltransferase 1 
 gma-u.5   100780444   glucuronoxylan 4-O-methyltransferase 1 
 vvi-u.5   100260885   glucuronoxylan 4-O-methyltransferase 1 
 vvi-u.5   100261855   glucuronoxylan 4-O-methyltransferase 2 
 vvi-u.5   100255018   glucuronoxylan 4-O-methyltransferase 3 
 ppo-u.5   7455267   glucuronoxylan 4-O-methyltransferase 3 
 ppo-u.5   18104325   glucuronoxylan 4-O-methyltransferase 3 
 ppo-u.5   18098343   glucuronoxylan 4-O-methyltransferase 1 
 mtr-u.5   11409087   glucuronoxylan 4-O-methyltransferase 2 
 sly-u.5   101263550   glucuronoxylan 4-O-methyltransferase 1 
 sly-u.5   101252840   glucuronoxylan 4-O-methyltransferase 3 
 sot-r.1   102603322   glucuronoxylan 4-O-methyltransferase 3 
 nta-r.1   107771245   glucuronoxylan 4-O-methyltransferase 1-like 
 nta-r.1   107772801   glucuronoxylan 4-O-methyltransferase 3-like 
 nta-r.1   107771244   glucuronoxylan 4-O-methyltransferase 1-like 
 osa-u.5   4351745   glucuronoxylan 4-O-methyltransferase 1 
 zma-u.5   103640992   glucuronoxylan 4-O-methyltransferase 1 
 zma-u.5   100280988   glucuronoxylan 4-O-methyltransferase 1 
 tae-r.2   123112765   glucuronoxylan 4-O-methyltransferase 1 
 tae-r.2   123122245   glucuronoxylan 4-O-methyltransferase 1 
 hvu-r.1   123408752   glucuronoxylan 4-O-methyltransferase 1-like 
 hvu-r.1   123396774   glucuronoxylan 4-O-methyltransferase 1-like 
 sbi-r.1   8084801   glucuronoxylan 4-O-methyltransferase 1 
 bdi-r.1   100829332   glucuronoxylan 4-O-methyltransferase 1 

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Top 50 coexpressed genes to GXM3 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to GXM3 (ath-m.4.lig coexpression data)

CoexMap"837488"


athGXM3 | Entrez gene ID : 837488      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 8 2 2 3 2 2 3 3 1 2 1 3 1 2 2 2 1 1 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045491 [list] [network] xylan metabolic process  (42 genes)  IMP  
GO CC
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
GO:0030775 [list] [network] glucuronoxylan 4-O-methyltransferase activity  (5 genes)  IDA  
Protein NP_172432.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 2,  vacu 2,  mito 1,  E.R._vacu 1,  nucl 1,  cyto 1,  plas 1,  extr 1,  E.R. 1,  golg 1,  cyto_nucl 1,  cyto_mito 1,  nucl_plas 1,  golg_plas 1,  E.R._plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_172432.1)
Subcellular
localization
TargetP
scret 7  (predict for NP_172432.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
GXM3
ath-m.9
for
GXM3
ath-m.4.bio
for
GXM3
ath-m.4.hor
for
GXM3
ath-m.4.str
for
GXM3
ath-m.4.tis
for
GXM3
ath-u.5
for
GXM2
ath-u.5
for
GXMT1
bra-r.6
for
103836322
bra-r.6
for
103840048
bna-r.1
for
106345221
bna-r.1
for
111200262
ghi-r.1
for
107920526
ghi-r.1
for
107922172
ghi-r.1
for
107941340
cit-r.1
for
102615379
cit-r.1
for
102624610
gma-u.5
for
100812805
gma-u.5
for
100780444
vvi-u.5
for
100260885
vvi-u.5
for
100261855
vvi-u.5
for
100255018
ppo-u.5
for
7455267
ppo-u.5
for
18104325
ppo-u.5
for
18098343
mtr-u.5
for
11409087
sly-u.5
for
101263550
sly-u.5
for
101252840
sot-r.1
for
102603322
nta-r.1
for
107771245
nta-r.1
for
107772801
nta-r.1
for
107771244
osa-u.5
for
4351745
zma-u.5
for
103640992
zma-u.5
for
100280988
tae-r.2
for
123112765
tae-r.2
for
123122245
hvu-r.1
for
123408752
hvu-r.1
for
123396774
sbi-r.1
for
8084801
bdi-r.1
for
100829332


Ortholog ID: 2284
Species ath ath bra bra bna bna ghi ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr sly sly sot nta nta nta osa zma zma tae tae tae hvu hvu sbi bdi
Symbol GXM2 GXMT1 LOC103836322 LOC103840048 LOC106345221 LOC111200262 LOC107920526 LOC107895085 LOC107904868 LOC102615379 LOC102624610 LOC100812805 LOC100780444 LOC100260885 LOC100255018 LOC7455267 LOC18104325 LOC18111132 LOC11409087 LOC101263550 LOC101252840 LOC102603322 LOC107771245 LOC107772801 LOC107771244 LOC4351745 LOC103640992 LOC100280988 LOC123112765 LOC123149868 LOC123159318 LOC123408752 LOC123396774 LOC8084801 LOC100829332
Function* glucuronoxylan 4-O-methyltransferase-like protein (DUF579) glucuronoxylan 4-O-methyltransferase-like protein (DUF579) glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 3 glucuronoxylan 4-O-methyltransferase 3 glucuronoxylan 4-O-methyltransferase 3-like glucuronoxylan 4-O-methyltransferase 3 glucuronoxylan 4-O-methyltransferase 3 glucuronoxylan 4-O-methyltransferase 3 glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 3 glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 3 glucuronoxylan 4-O-methyltransferase 3 glucuronoxylan 4-O-methyltransferase 3 glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 2 glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 3 glucuronoxylan 4-O-methyltransferase 3 glucuronoxylan 4-O-methyltransferase 1-like glucuronoxylan 4-O-methyltransferase 3-like glucuronoxylan 4-O-methyltransferase 1-like glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 1-like glucuronoxylan 4-O-methyltransferase 1-like glucuronoxylan 4-O-methyltransferase 1 glucuronoxylan 4-O-methyltransferase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 3
bna00564 Glycerophospholipid metabolism 3
bna04814 Motor proteins 2
bna04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00561 Glycerolipid metabolism 3
bna00564 Glycerophospholipid metabolism 3
bna04814 Motor proteins 2
bna00940 Phenylpropanoid biosynthesis 2
bna04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00944 Flavone and flavonol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00052 Galactose metabolism 2
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00520 Amino sugar and nucleotide sugar metabolism 2
gma01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 5
ppo01230 Biosynthesis of amino acids 3
ppo01240 Biosynthesis of cofactors 3
ppo00270 Cysteine and methionine metabolism 3
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00670 One carbon pool by folate 7
ppo01230 Biosynthesis of amino acids 5
ppo01240 Biosynthesis of cofactors 5
ppo00270 Cysteine and methionine metabolism 4
ppo01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00270 Cysteine and methionine metabolism 3
zma01230 Biosynthesis of amino acids 3
zma00562 Inositol phosphate metabolism 2
zma04070 Phosphatidylinositol signaling system 2
zma00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826590 840272 103836322 103840048 106345221 111200262 107920526 107895085 107904868 102615379 102624610 100812805 100780444 100260885 100255018 7455267 18104325 18111132 11409087 101263550 101252840 102603322 107771245 107772801 107771244 4351745 103640992 100280988 123112765 123149868 123159318 123408752 123396774 8084801 100829332
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