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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   XBCP3   xylem bark cysteine peptidase 3 
 ath-u.5   XBCP3   xylem bark cysteine peptidase 3 
 ath-r.7   XBCP3   xylem bark cysteine peptidase 3 
 ath-m.9   XBCP3   xylem bark cysteine peptidase 3 
 ath-e.2   XBCP3   xylem bark cysteine peptidase 3 
 ath-m.4.bio   XBCP3   xylem bark cysteine peptidase 3 
 ath-m.4.hor   XBCP3   xylem bark cysteine peptidase 3 
 ath-m.4.str   XBCP3   xylem bark cysteine peptidase 3 
 ath-m.4.tis   XBCP3   xylem bark cysteine peptidase 3 
 bra-r.6   103871765   low-temperature-induced cysteine proteinase 
 bna-r.1   106346237   low-temperature-induced cysteine proteinase-like 
 bna-r.1   106400902   low-temperature-induced cysteine proteinase 
 ghi-r.1   107902646   low-temperature-induced cysteine proteinase 
 ghi-r.1   107905474   zingipain-2 
 cit-r.1   102631038   cysteine proteinase COT44 
 gma-u.5   100805596   low-temperature-induced cysteine proteinase 
 vvi-u.5   100243729   zingipain-2 
 ppo-u.5   7477639   zingipain-2 
 mtr-u.5   25490239   low-temperature-induced cysteine proteinase 
 sly-u.5   101247912   low-temperature-induced cysteine proteinase-like 
 sot-r.1   102578718   zingipain-2 
 nta-r.1   107810159   cysteine proteinase COT44 
 nta-r.1   107816599   low-temperature-induced cysteine proteinase 
 osa-u.5   4339265   low-temperature-induced cysteine proteinase 
 zma-u.5   100273952   xylem bark cysteine peptidase 3 

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Top 50 coexpressed genes to XBCP3 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to XBCP3 (ath-m.4.lig coexpression data)

CoexMap"837517"


athXBCP3 | Entrez gene ID : 837517      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae bdi sbi hvu cre
Paralog 9 1 2 2 1 1 1 1 1 1 1 2 1 1 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  HDA ISM  
GO MF
Protein NP_563855.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 3,  extr 2,  E.R. 1,  cyto_nucl 1,  chlo_mito 1,  cysk_nucl 1,  nucl_plas 1  (predict for NP_563855.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_563855.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
XBCP3
ath-u.5
for
XBCP3
ath-r.7
for
XBCP3
ath-m.9
for
XBCP3
ath-e.2
for
XBCP3
ath-m.4.bio
for
XBCP3
ath-m.4.hor
for
XBCP3
ath-m.4.str
for
XBCP3
ath-m.4.tis
for
XBCP3
bra-r.6
for
103871765
bna-r.1
for
106346237
bna-r.1
for
106400902
ghi-r.1
for
107902646
ghi-r.1
for
107905474
cit-r.1
for
102631038
gma-u.5
for
100805596
vvi-u.5
for
100243729
ppo-u.5
for
7477639
mtr-u.5
for
25490239
sly-u.5
for
101247912
sot-r.1
for
102578718
nta-r.1
for
107810159
nta-r.1
for
107816599
osa-u.5
for
4339265
zma-u.5
for
100273952


Ortholog ID: 12947
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma
Symbol XBCP3 LOC103871765 LOC106346237 LOC106400902 LOC107902646 LOC107905474 LOC102631038 LOC100805596 LOC100243729 LOC7477639 LOC25490239 LOC101247912 LOC102578718 LOC107810159 LOC107816599 LOC4339265 LOC100273952
Function* xylem bark cysteine peptidase 3 low-temperature-induced cysteine proteinase low-temperature-induced cysteine proteinase-like low-temperature-induced cysteine proteinase low-temperature-induced cysteine proteinase zingipain-2 cysteine proteinase COT44 low-temperature-induced cysteine proteinase zingipain-2 zingipain-2 low-temperature-induced cysteine proteinase low-temperature-induced cysteine proteinase-like zingipain-2 cysteine proteinase COT44 low-temperature-induced cysteine proteinase low-temperature-induced cysteine proteinase xylem bark cysteine peptidase 3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 3
bra00510 N-Glycan biosynthesis 2
bra00513 Various types of N-glycan biosynthesis 2
bra00220 Arginine biosynthesis 2
bra01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna00510 N-Glycan biosynthesis 3
bna02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 4
bna00510 N-Glycan biosynthesis 3
bna02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 3
cit04120 Ubiquitin mediated proteolysis 3
cit04141 Protein processing in endoplasmic reticulum 3
cit04142 Lysosome 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00230 Purine metabolism 3
mtr00053 Ascorbate and aldarate metabolism 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00270 Cysteine and methionine metabolism 3
sly00330 Arginine and proline metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 5
sot01230 Biosynthesis of amino acids 3
sot00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00510 N-Glycan biosynthesis 2
osa00513 Various types of N-glycan biosynthesis 2
osa04141 Protein processing in endoplasmic reticulum 2
osa04142 Lysosome 2
osa00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837517 103871765 106346237 106400902 107902646 107905474 102631038 100805596 100243729 7477639 25490239 101247912 102578718 107810159 107816599 4339265 100273952
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