ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.lig	AT1G15900	uncharacterized protein
ath-m.9	AT1G15900	uncharacterized protein
ath-m.4.bio	AT1G15900	uncharacterized protein
ath-m.4.hor	AT1G15900	uncharacterized protein
ath-m.4.str	AT1G15900	uncharacterized protein
ath-m.4.tis	AT1G15900	uncharacterized protein
ghi-r.1	107891625	uncharacterized LOC107891625
cit-r.1	102629415	uncharacterized LOC102629415
gma-u.5	100809039	uncharacterized LOC100809039
vvi-u.5	100253325	uncharacterized LOC100253325
ppo-u.5	18094534	uncharacterized LOC18094534
mtr-u.5	25487970	uncharacterized LOC25487970
sly-u.5	101244168	uncharacterized LOC101244168
sot-r.1	102599546	uncharacterized LOC102599546
zma-u.5	100275451	uncharacterized LOC100275451
cre-r.1	CHLRE_16g667150v5	uncharacterized protein

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005739 [list] [network] mitochondrion

(4244 genes)

ISM

GO MF

Protein

NP_173042.1 [sequence] [blastp]

Subcellular
localization
wolf

cyto 6, vacu 2, mito 1, plas 1, mito_plas 1

(predict for NP_173042.1)

Subcellular
localization
TargetP

other 7, chlo 3

(predict for NP_173042.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.lig for AT1G15900	ath-m.9 for AT1G15900	ath-m.4.bio for AT1G15900	ath-m.4.hor for AT1G15900	ath-m.4.str for AT1G15900	ath-m.4.tis for AT1G15900	ghi-r.1 for 107891625	cit-r.1 for 102629415	gma-u.5 for 100809039	vvi-u.5 for 100253325	ppo-u.5 for 18094534	mtr-u.5 for 25487970	sly-u.5 for 101244168	sot-r.1 for 102599546	zma-u.5 for 100275451	cre-r.1 for CHLRE_16g667150v5

Ortholog

Ortholog ID: 12484

Species

ghi

cit

gma

vvi

ppo

mtr

sly

sot

zma

cre

Symbol

Function^*

uncharacterized LOC107891625

uncharacterized LOC102629415

uncharacterized LOC100809039

uncharacterized LOC100253325

uncharacterized LOC18094534

uncharacterized LOC25487970

uncharacterized LOC101244168

uncharacterized LOC102599546

uncharacterized LOC100275451

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00541	Biosynthesis of various nucleotide sugars	3
gma01250	Biosynthesis of nucleotide sugars	3
gma00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	2
ppo04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00514	Other types of O-glycan biosynthesis	3
cre00600	Sphingolipid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107891625

102629415

100809039

100253325

18094534

25487970

101244168

102599546

100275451

5717687

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT1G15900 (ath-m.4.lig coexpression data)

Top 50 enrichment test to AT1G15900 (ath-m.4.lig coexpression data)


Species	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	zma	cre	sbi	osa	bra	tae	bna	hvu	nta	bdi
Paralog	6	1	1	1	1	1	1	1	1	1	1	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT1G15900 (ath-m.4.lig coexpression data)

Top 50 enrichment test to AT1G15900 (ath-m.4.lig coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**