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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   TAF4B   TBP-associated factor 4B 
 ath-u.5   TAF4B   TBP-associated factor 4B 
 ath-r.7   TAF4B   TBP-associated factor 4B 
 ath-m.9   TAF4B   TBP-associated factor 4B 
 ath-e.2   TAF4B   TBP-associated factor 4B 
 ath-m.4.bio   TAF4B   TBP-associated factor 4B 
 ath-m.4.hor   TAF4B   TBP-associated factor 4B 
 ath-m.4.str   TAF4B   TBP-associated factor 4B 
 ath-m.4.tis   TAF4B   TBP-associated factor 4B 
 bra-r.6   103829049   transcription initiation factor TFIID subunit 4 
 bna-r.1   106358027   transcription initiation factor TFIID subunit 4 
 bna-r.1   111211405   transcription initiation factor TFIID subunit 4-like 

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Top 50 coexpressed genes to TAF4B (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TAF4B (ath-m.4.lig coexpression data)

CoexMap"839665"


athTAF4B | Entrez gene ID : 839665      
Species ath bra bna cre vvi ppo mtr hvu tae osa gma zma sly ghi cit sbi nta bdi sot
Paralog 9 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03022 [list] [network] Basal transcription factors (55 genes)
GO BP
GO CC
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001320203.1 [sequence] [blastp]
NP_001320204.1 [sequence] [blastp]
NP_001320205.1 [sequence] [blastp]
NP_001320206.1 [sequence] [blastp]
NP_001320207.1 [sequence] [blastp]
NP_001320208.1 [sequence] [blastp]
NP_001320209.1 [sequence] [blastp]
NP_001320210.1 [sequence] [blastp]
NP_174093.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9  (predict for NP_001320203.1)
nucl 9  (predict for NP_001320204.1)
nucl 10  (predict for NP_001320205.1)
nucl 9  (predict for NP_001320206.1)
nucl 9,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001320207.1)
nucl 9  (predict for NP_001320208.1)
nucl 9  (predict for NP_001320209.1)
nucl 10  (predict for NP_001320210.1)
nucl 10  (predict for NP_174093.3)
Subcellular
localization
TargetP
other 9  (predict for NP_001320203.1)
other 9  (predict for NP_001320204.1)
other 8  (predict for NP_001320205.1)
other 9  (predict for NP_001320206.1)
other 9  (predict for NP_001320207.1)
other 9  (predict for NP_001320208.1)
other 9  (predict for NP_001320209.1)
other 9  (predict for NP_001320210.1)
other 8  (predict for NP_174093.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
TAF4B
ath-u.5
for
TAF4B
ath-r.7
for
TAF4B
ath-m.9
for
TAF4B
ath-e.2
for
TAF4B
ath-m.4.bio
for
TAF4B
ath-m.4.hor
for
TAF4B
ath-m.4.str
for
TAF4B
ath-m.4.tis
for
TAF4B
bra-r.6
for
103829049
bna-r.1
for
106358027
bna-r.1
for
111211405


Ortholog ID: 23085
Species ath bra bna bna
Symbol TAF4B LOC103829049 LOC106358027 LOC111211405
Function* TBP-associated factor 4B transcription initiation factor TFIID subunit 4 transcription initiation factor TFIID subunit 4 transcription initiation factor TFIID subunit 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03022 Basal transcription factors 2
bna03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839665 103829049 106358027 111211405
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