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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   AT1G28540   uncharacterized protein 
 ath-u.5   AT1G28540   uncharacterized protein 
 ath-r.7   AT1G28540   uncharacterized protein 
 ath-m.9   AT1G28540   uncharacterized protein 
 ath-e.2   AT1G28540   uncharacterized protein 
 ath-m.4.bio   AT1G28540   uncharacterized protein 
 ath-m.4.hor   AT1G28540   uncharacterized protein 
 ath-m.4.str   AT1G28540   uncharacterized protein 
 ath-m.4.tis   AT1G28540   uncharacterized protein 
 bra-r.6   103835311   uncharacterized LOC103835311 
 bra-r.6   103829002   uncharacterized LOC103829002 
 bna-r.1   BNAC07G10280D   uncharacterized BNAC07G10280D 
 bna-r.1   106386023   uncharacterized LOC106386023 
 bna-r.1   106361679   uncharacterized LOC106361679 
 ghi-r.1   107927649   uncharacterized LOC107927649 
 cit-r.1   102626648   hypothetical protein 
 gma-u.5   100306530   hypothetical protein 
 ppo-u.5   7470213   uncharacterized LOC7470213 
 mtr-u.5   11446074   uncharacterized LOC11446074 
 sly-u.5   101253135   uncharacterized LOC101253135 
 sot-r.1   102588419   uncharacterized LOC102588419 
 osa-u.5   4341181   uncharacterized LOC4341181 
 zma-u.5   100276323   uncharacterized LOC100276323 
 tae-r.2   123167766   uncharacterized LOC123167766 
 tae-r.2   123147936   uncharacterized LOC123147936 
 hvu-r.1   123412625   uncharacterized LOC123412625 
 sbi-r.1   8072626   uncharacterized LOC8072626 
 bdi-r.1   100843727   uncharacterized LOC100843727 

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Top 50 coexpressed genes to AT1G28540 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G28540 (ath-m.4.lig coexpression data)

CoexMap"839754"


athAT1G28540 | Entrez gene ID : 839754      
Species ath bra bna ghi cit gma ppo mtr sly sot osa zma tae hvu sbi bdi cre nta vvi
Paralog 9 2 3 1 1 1 1 1 1 1 1 1 2 1 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005741 [list] [network] mitochondrial outer membrane  (37 genes)  IDA  
GO:0009527 [list] [network] plastid outer membrane  (53 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_564312.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  mito 3  (predict for NP_564312.1)
Subcellular
localization
TargetP
other 8,  chlo 4  (predict for NP_564312.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
AT1G28540
ath-u.5
for
AT1G28540
ath-r.7
for
AT1G28540
ath-m.9
for
AT1G28540
ath-e.2
for
AT1G28540
ath-m.4.bio
for
AT1G28540
ath-m.4.hor
for
AT1G28540
ath-m.4.str
for
AT1G28540
ath-m.4.tis
for
AT1G28540
bra-r.6
for
103835311
bra-r.6
for
103829002
bna-r.1
for
BNAC07G10280D
bna-r.1
for
106386023
bna-r.1
for
106361679
ghi-r.1
for
107927649
cit-r.1
for
102626648
gma-u.5
for
100306530
ppo-u.5
for
7470213
mtr-u.5
for
11446074
sly-u.5
for
101253135
sot-r.1
for
102588419
osa-u.5
for
4341181
zma-u.5
for
100276323
tae-r.2
for
123167766
tae-r.2
for
123147936
hvu-r.1
for
123412625
sbi-r.1
for
8072626
bdi-r.1
for
100843727


Ortholog ID: 12034
Species ath bra bra bna bna bna ghi cit gma ppo mtr sly sot osa zma tae tae hvu sbi bdi
Symbol AT1G28540 LOC103835311 LOC103829002 LOC106386023 LOC106361679 LOC106356344 LOC107927649 LOC102626648 LOC100306530 LOC7470213 LOC11446074 LOC101253135 LOC102588419 LOC4341181 LOC100276323 LOC123167766 LOC123147936 LOC123412625 LOC8072626 LOC100843727
Function* uncharacterized protein uncharacterized LOC103835311 uncharacterized LOC103829002 uncharacterized LOC106386023 uncharacterized LOC106361679 uncharacterized LOC106356344 uncharacterized LOC107927649 hypothetical protein hypothetical protein uncharacterized LOC7470213 uncharacterized LOC11446074 uncharacterized LOC101253135 uncharacterized LOC102588419 uncharacterized LOC4341181 uncharacterized LOC100276323 uncharacterized LOC123167766 uncharacterized LOC123147936 uncharacterized LOC123412625 uncharacterized LOC8072626 uncharacterized LOC100843727
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 6
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00240 Pyrimidine metabolism 2
mtr01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839754 103835311 103829002 106386023 106361679 106356344 107927649 102626648 100306530 7470213 11446074 101253135 102588419 4341181 100276323 123167766 123147936 123412625 8072626 100843727
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