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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   TRM12   hypothetical protein (DUF3741) 
 ath-u.5   TRM12   hypothetical protein (DUF3741) 
 ath-r.7   TRM12   hypothetical protein (DUF3741) 
 ath-m.9   TRM12   hypothetical protein (DUF3741) 
 ath-e.2   TRM12   hypothetical protein (DUF3741) 
 ath-m.4.bio   TRM12   hypothetical protein (DUF3741) 
 ath-m.4.hor   TRM12   hypothetical protein (DUF3741) 
 ath-m.4.str   TRM12   hypothetical protein (DUF3741) 
 ath-m.4.tis   TRM12   hypothetical protein (DUF3741) 
 bra-r.6   103838091   uncharacterized LOC103838091 
 bra-r.6   103838260   uncharacterized LOC103838260 
 bna-r.1   125581719   uncharacterized LOC125581719 
 bna-r.1   111203913   uncharacterized LOC111203913 
 bna-r.1   106450725   uncharacterized LOC106450725 
 ghi-r.1   121204656   uncharacterized LOC121204656 
 ghi-r.1   107936684   uncharacterized LOC107936684 

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Top 50 coexpressed genes to TRM12 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TRM12 (ath-m.4.lig coexpression data)

CoexMap"842671"


athTRM12 | Entrez gene ID : 842671      
Species ath bra bna ghi cre vvi ppo mtr hvu nta tae bdi osa gma zma sly cit sot sbi
Paralog 9 2 3 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001077766.1 [sequence] [blastp]
NP_001077767.1 [sequence] [blastp]
NP_001320654.1 [sequence] [blastp]
NP_001320655.1 [sequence] [blastp]
NP_176554.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 4,  mito 1  (predict for NP_001077766.1)
nucl 4,  chlo 4,  mito 1  (predict for NP_001077767.1)
nucl 4,  chlo 4,  mito 1  (predict for NP_001320654.1)
nucl 6,  chlo 1,  cysk 1  (predict for NP_001320655.1)
nucl 4,  chlo 4,  mito 1  (predict for NP_176554.1)
Subcellular
localization
TargetP
other 5,  mito 3  (predict for NP_001077766.1)
other 5,  mito 3  (predict for NP_001077767.1)
other 5,  mito 3  (predict for NP_001320654.1)
other 5,  mito 3  (predict for NP_001320655.1)
other 5,  mito 3  (predict for NP_176554.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
TRM12
ath-u.5
for
TRM12
ath-r.7
for
TRM12
ath-m.9
for
TRM12
ath-e.2
for
TRM12
ath-m.4.bio
for
TRM12
ath-m.4.hor
for
TRM12
ath-m.4.str
for
TRM12
ath-m.4.tis
for
TRM12
bra-r.6
for
103838091
bra-r.6
for
103838260
bna-r.1
for
125581719
bna-r.1
for
111203913
bna-r.1
for
106450725
ghi-r.1
for
121204656
ghi-r.1
for
107936684


Ortholog ID: 14069
Species ath bra bra bna bna bna ghi ghi
Symbol TRM12 LOC103838091 LOC103838260 LOC106450725 BNAA09G12400D LOC125585197 LOC121204656 LOC107936684
Function* hypothetical protein (DUF3741) uncharacterized LOC103838091 uncharacterized LOC103838260 uncharacterized LOC106450725 uncharacterized BNAA09G12400D uncharacterized LOC125585197 uncharacterized LOC121204656 uncharacterized LOC107936684
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
bna03015 mRNA surveillance pathway 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 842671 103838091 103838260 106450725 106366511 125585197 121204656 107936684
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