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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-u.5   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-r.7   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.9   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-e.2   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.bio   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.hor   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.str   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-m.4.tis   WRI4   Integrase-type DNA-binding superfamily protein 
 ath-u.5   PLT1   Integrase-type DNA-binding superfamily protein 
 ath-u.5   PLT2   Integrase-type DNA-binding superfamily protein 
 bra-r.6   103871295   AP2-like ethylene-responsive transcription factor PLT2 
 bra-r.6   103872406   AP2-like ethylene-responsive transcription factor At1g16060 
 bra-r.6   103874158   AP2-like ethylene-responsive transcription factor AIL7 
 bna-r.1   106385624   AP2-like ethylene-responsive transcription factor BBM2 
 bna-r.1   106426845   AP2-like ethylene-responsive transcription factor ANT 
 bna-r.1   106384892   AP2-like ethylene-responsive transcription factor AIL6 
 ghi-r.1   107914355   AP2-like ethylene-responsive transcription factor AIL6 
 cit-r.1   102611374   AP2-like ethylene-responsive transcription factor AIL5 
 cit-r.1   102627784   AP2-like ethylene-responsive transcription factor AIL1 
 gma-u.5   100775390   AP2-like ethylene-responsive transcription factor AIL6 
 gma-u.5   100777168   AP2-like ethylene-responsive transcription factor AIL6 
 gma-u.5   100779867   AP2/EREBP transcription factor 
 ppo-u.5   112324045   AP2-like ethylene-responsive transcription factor ANT 
 mtr-u.5   11410800   ethylene-responsive transcription factor WRI1 
 mtr-u.5   11445798   AP2-like ethylene-responsive transcription factor AIL5 
 sly-u.5   101262024   AP2-like ethylene-responsive transcription factor AIL5 
 sly-u.5   101259843   AP2-like ethylene-responsive transcription factor AIL6 
 sly-u.5   101255411   AP2-like ethylene-responsive transcription factor At1g16060 
 sot-r.1   102594405   AP2-like ethylene-responsive transcription factor AIL1 
 sot-r.1   102591293   AP2-like ethylene-responsive transcription factor At1g16060 
 sot-r.1   102589729   AP2-like ethylene-responsive transcription factor AIL5 
 nta-r.1   107813200   AP2-like ethylene-responsive transcription factor AIL6 
 nta-r.1   107814036   uncharacterized LOC107814036 
 nta-r.1   107814838   AP2-like ethylene-responsive transcription factor At1g16060 
 zma-u.5   100217237   uncharacterized LOC100217237 
 zma-u.5   100279914   uncharacterized LOC100279914 
 zma-u.5   100281144   protein BABY BOOM 1 
 hvu-r.1   123403252   AP2-like ethylene-responsive transcription factor AIL7 
 hvu-r.1   123411068   AP2-like ethylene-responsive transcription factor AIL5 
 hvu-r.1   123395814   AP2-like ethylene-responsive transcription factor At1g16060 
 sbi-r.1   8077856   AP2-like ethylene-responsive transcription factor AIL5 
 bdi-r.1   100837521   AP2-like ethylene-responsive transcription factor ANT 
 cre-r.1   CHLRE_16g667900v5   uncharacterized protein 

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Top 50 coexpressed genes to WRI4 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to WRI4 (ath-m.4.lig coexpression data)

CoexMap"844309"


athWRI4 | Entrez gene ID : 844309      
Species ath bra bna ghi cit gma ppo mtr sly sot nta zma hvu sbi bdi cre tae vvi osa
Paralog 11 3 3 1 2 3 1 2 3 3 3 3 3 1 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1901959 [list] [network] positive regulation of cutin biosynthetic process  (4 genes)  IGI  
GO:0045723 [list] [network] positive regulation of fatty acid biosynthetic process  (7 genes)  IGI IMP  
GO:1904278 [list] [network] positive regulation of wax biosynthetic process  (7 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IC IDA ISM  
GO MF
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (47 genes)  IPI  
GO:0000976 [list] [network] transcription cis-regulatory region binding  (716 genes)  IDA  
GO:0043565 [list] [network] sequence-specific DNA binding  (875 genes)  IDA  
GO:0003677 [list] [network] DNA binding  (1274 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  IDA IEA ISS  
Protein NP_001077849.1 [sequence] [blastp]
NP_001322217.1 [sequence] [blastp]
NP_001322218.1 [sequence] [blastp]
NP_178088.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001077849.1)
nucl 4,  cyto 3,  nucl_plas 3  (predict for NP_001322217.1)
nucl 6,  cyto 1,  plas 1,  cyto_plas 1  (predict for NP_001322218.1)
nucl 10  (predict for NP_178088.2)
Subcellular
localization
TargetP
chlo 7,  other 4  (predict for NP_001077849.1)
other 8  (predict for NP_001322217.1)
other 7,  scret 4  (predict for NP_001322218.1)
chlo 7,  other 4  (predict for NP_178088.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
WRI4
ath-u.5
for
WRI4
ath-r.7
for
WRI4
ath-m.9
for
WRI4
ath-e.2
for
WRI4
ath-m.4.bio
for
WRI4
ath-m.4.hor
for
WRI4
ath-m.4.str
for
WRI4
ath-m.4.tis
for
WRI4
ath-u.5
for
PLT1
ath-u.5
for
PLT2
bra-r.6
for
103871295
bra-r.6
for
103872406
bra-r.6
for
103874158
bna-r.1
for
106385624
bna-r.1
for
106426845
bna-r.1
for
106384892
ghi-r.1
for
107914355
cit-r.1
for
102611374
cit-r.1
for
102627784
gma-u.5
for
100775390
gma-u.5
for
100777168
gma-u.5
for
100779867
ppo-u.5
for
112324045
mtr-u.5
for
11410800
mtr-u.5
for
11445798
sly-u.5
for
101262024
sly-u.5
for
101259843
sly-u.5
for
101255411
sot-r.1
for
102594405
sot-r.1
for
102591293
sot-r.1
for
102589729
nta-r.1
for
107813200
nta-r.1
for
107814036
nta-r.1
for
107814838
zma-u.5
for
100217237
zma-u.5
for
100279914
zma-u.5
for
100281144
hvu-r.1
for
123403252
hvu-r.1
for
123411068
hvu-r.1
for
123395814
sbi-r.1
for
8077856
bdi-r.1
for
100837521
cre-r.1
for
CHLRE_16g667900v5


Ortholog ID: 41
Species ath ath ath bra bra bra bna bna ghi ghi cit cit cit gma gma vvi ppo ppo mtr mtr sly sly sly sot nta nta nta osa osa zma zma tae hvu sbi sbi bdi cre
Symbol WRI4 AIL5 WRI1 LOC103835650 LOC103869225 LOC103855873 LOC111197701 LOC106416655 LOC107935489 LOC121222423 LOC102611011 LOC102615846 LOC102617899 LOC100170752 WRI1A LOC100257805 LOC18100496 LOC7455773 LOC11435545 LOC25491215 LOC101259843 LIA LOC101248536 LOC102603788 LOC142162695 LOC107822342 LOC107789316 LOC9268480 LOC4342308 LOC100217129 LOC103635988 LOC123098633 LOC123445041 LOC8077856 LOC8085254 LOC100845569 CHLRE_16g667900v5
Function* Integrase-type DNA-binding superfamily protein AINTEGUMENTA-like 5 Integrase-type DNA-binding superfamily protein AP2-like ethylene-responsive transcription factor PLT1 AP2-like ethylene-responsive transcription factor PLT1 AP2-like ethylene-responsive transcription factor AIL6 AP2-like ethylene-responsive transcription factor ANT AP2-like ethylene-responsive transcription factor AIL6 ethylene-responsive transcription factor WRI1 AP2-like ethylene-responsive transcription factor AIL6 AP2-like ethylene-responsive transcription factor AIL5 AP2-like ethylene-responsive transcription factor AIL6 AP2-like ethylene-responsive transcription factor ANT PLETHORA 2 ethylene-responsive transcription factor WRI1a AP2-like ethylene-responsive transcription factor ANT AP2-like ethylene-responsive transcription factor AIL5 AP2-like ethylene-responsive transcription factor At1g16060 AP2-like ethylene-responsive transcription factor BBM1 AP2-like ethylene-responsive transcription factor At1g16060 AP2-like ethylene-responsive transcription factor AIL6 AP2 domain transcription factor LIA AP2-like ethylene-responsive transcription factor AIL6 AP2-like ethylene-responsive transcription factor AIL6 AP2-like ethylene-responsive transcription factor ANT AP2-like ethylene-responsive transcription factor PLT2 AP2-like ethylene-responsive transcription factor ANT AP2-like ethylene-responsive transcription factor AIL5 AP2-like ethylene-responsive transcription factor CRL5 uncharacterized LOC100217129 ethylene-responsive transcription factor WRI1 AP2-like ethylene-responsive transcription factor AIL1 AP2-like ethylene-responsive transcription factor BBM2 AP2-like ethylene-responsive transcription factor AIL5 AP2-like ethylene-responsive transcription factor ANT AP2-like ethylene-responsive transcription factor AIL5 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00280 Valine, leucine and isoleucine degradation 6
ath00640 Propanoate metabolism 3
ath01210 2-Oxocarboxylic acid metabolism 3
ath00785 Lipoic acid metabolism 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
bra01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00280 Valine, leucine and isoleucine degradation 4
gma01210 2-Oxocarboxylic acid metabolism 4
gma01240 Biosynthesis of cofactors 4
gma00010 Glycolysis / Gluconeogenesis 2
gma00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00062 Fatty acid elongation 3
ppo01040 Biosynthesis of unsaturated fatty acids 3
ppo01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00561 Glycerolipid metabolism 4
mtr00564 Glycerophospholipid metabolism 4
mtr00073 Cutin, suberine and wax biosynthesis 2
mtr02010 ABC transporters 2
mtr04981 Folate transport and metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 6
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00010 Glycolysis / Gluconeogenesis 2
sot00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
nta00040 Pentose and glucuronate interconversions 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00052 Galactose metabolism 2
tae00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00940 Phenylpropanoid biosynthesis 2
hvu00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
sbi00240 Pyrimidine metabolism 2
sbi01232 Nucleotide metabolism 2
sbi00051 Fructose and mannose metabolism 2
sbi00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi02010 ABC transporters 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844309 835845 824599 103835650 103869225 103855873 111197701 106416655 107935489 121222423 102611011 102615846 102617899 100170752 100789774 100257805 18100496 7455773 11435545 25491215 101259843 101251371 101248536 102603788 142162695 107822342 107789316 9268480 4342308 100217129 103635988 123098633 123445041 8077856 8085254 100845569 5717710
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