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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.lig   TED3   Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-u.5   TED3   Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-r.7   TED3   Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.9   TED3   Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-e.2   TED3   Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.bio   TED3   Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.hor   TED3   Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.str   TED3   Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein 
 ath-m.4.tis   TED3   Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein 
 bra-r.6   103830400   peroxisome biogenesis protein 2 
 bna-r.1   106353338   peroxisome biogenesis protein 2 
 bna-r.1   106383067   peroxisome biogenesis protein 2 
 ghi-r.1   107922868   peroxisome biogenesis protein 2 
 ghi-r.1   107914175   peroxisome biogenesis protein 2 
 ghi-r.1   107937319   peroxisome biogenesis protein 2 
 cit-r.1   102621715   peroxisome biogenesis protein 2 
 gma-u.5   100805856   peroxisome biogenesis protein 2 
 gma-u.5   100800681   peroxisome biogenesis protein 2 
 vvi-u.5   100246296   peroxisome biogenesis protein 2 
 ppo-u.5   7483538   peroxisome biogenesis protein 2 
 ppo-u.5   7475082   peroxisome biogenesis protein 2 
 mtr-u.5   11435007   peroxisome biogenesis protein 2 
 sly-u.5   101251298   peroxisome biogenesis protein 2 
 sot-r.1   102603981   peroxisome biogenesis protein 2 
 nta-r.1   107830005   peroxisome biogenesis protein 2-like 
 nta-r.1   107801117   peroxisome biogenesis protein 2 
 osa-u.5   4338276   peroxisome biogenesis protein 2 
 zma-u.5   100193229   peroxisome assembly factor 1 
 tae-r.2   123157225   peroxisome biogenesis protein 2 
 tae-r.2   123147392   peroxisome biogenesis protein 2 
 tae-r.2   123165933   peroxisome biogenesis protein 2 
 hvu-r.1   123410613   peroxisome biogenesis protein 2 
 sbi-r.1   8070130   peroxisome biogenesis protein 2 
 sbi-r.1   110429933   peroxisome biogenesis protein 2-like 
 bdi-r.1   100821323   peroxisome biogenesis protein 2 
 cre-r.1   CHLRE_17g698800v5   uncharacterized protein 

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Top 50 coexpressed genes to TED3 (ath-m.4.lig coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TED3 (ath-m.4.lig coexpression data)

CoexMap"844320"


athTED3 | Entrez gene ID : 844320      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 2 1 2 1 1 1 2 1 1 3 1 2 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04146 [list] [network] Peroxisome (90 genes)
GO BP
GO:0006513 [list] [network] protein monoubiquitination  (4 genes)  IDA  
GO:0016558 [list] [network] protein import into peroxisome matrix  (9 genes)  IEA IMP  
GO:0006635 [list] [network] fatty acid beta-oxidation  (24 genes)  IMP  
GO:0007031 [list] [network] peroxisome organization  (31 genes)  IMP  
GO:0009640 [list] [network] photomorphogenesis  (77 genes)  IMP  
GO CC
GO:0005777 [list] [network] peroxisome  (313 genes)  IDA  
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005783 [list] [network] endoplasmic reticulum  (897 genes)  IDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (268 genes)  IDA  
GO:0008270 [list] [network] zinc ion binding  (391 genes)  IEA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_565222.1 [sequence] [blastp]
NP_974183.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 5,  cyto 3,  pero 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_565222.1)
chlo 4,  nucl 3,  cyto 2,  pero 1,  cysk 1  (predict for NP_974183.1)
Subcellular
localization
TargetP
other 3  (predict for NP_565222.1)
scret 9,  other 5  (predict for NP_974183.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.lig
for
TED3
ath-u.5
for
TED3
ath-r.7
for
TED3
ath-m.9
for
TED3
ath-e.2
for
TED3
ath-m.4.bio
for
TED3
ath-m.4.hor
for
TED3
ath-m.4.str
for
TED3
ath-m.4.tis
for
TED3
bra-r.6
for
103830400
bna-r.1
for
106353338
bna-r.1
for
106383067
ghi-r.1
for
107922868
ghi-r.1
for
107914175
ghi-r.1
for
107937319
cit-r.1
for
102621715
gma-u.5
for
100805856
gma-u.5
for
100800681
vvi-u.5
for
100246296
ppo-u.5
for
7483538
ppo-u.5
for
7475082
mtr-u.5
for
11435007
sly-u.5
for
101251298
sot-r.1
for
102603981
nta-r.1
for
107830005
nta-r.1
for
107801117
osa-u.5
for
4338276
zma-u.5
for
100193229
tae-r.2
for
123157225
tae-r.2
for
123147392
tae-r.2
for
123165933
hvu-r.1
for
123410613
sbi-r.1
for
8070130
sbi-r.1
for
110429933
bdi-r.1
for
100821323
cre-r.1
for
CHLRE_17g698800v5


Ortholog ID: 8784
Species ath bra bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi sbi bdi cre
Symbol TED3 LOC103830400 LOC106353338 LOC106383067 LOC107922868 LOC107914175 LOC107937319 LOC102621715 LOC100805856 LOC100800681 LOC100246296 LOC7483538 LOC7475082 LOC11435007 LOC101251298 LOC102603981 LOC107830005 LOC107801117 LOC4338276 LOC100193229 LOC123157225 LOC123147392 LOC123165933 LOC123410613 LOC8070130 LOC110429933 LOC100821323 CHLRE_17g698800v5
Function* Pex2/Pex12 N-terminal domain-containing protein / zinc finger (C3HC4-type RING finger) family protein peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2-like peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome assembly factor 1 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2 peroxisome biogenesis protein 2-like peroxisome biogenesis protein 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04146 Peroxisome 3
ath01200 Carbon metabolism 3
ath03410 Base excision repair 2
ath00020 Citrate cycle (TCA cycle) 2
ath01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi04136 Autophagy - other 6
ghi04382 Cornified envelope formation 6
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 2
ghi03410 Base excision repair 2
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03015 mRNA surveillance pathway 6
ghi04136 Autophagy - other 6
ghi04382 Cornified envelope formation 6
ghi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 4
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 2
nta04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04146 Peroxisome 3
osa04120 Ubiquitin mediated proteolysis 3
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
tae04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04146 Peroxisome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03083 Polycomb repressive complex 2
hvu03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04146 Peroxisome 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844320 103830400 106353338 106383067 107922868 107914175 107937319 102621715 100805856 100800681 100246296 7483538 7475082 11435007 101251298 102603981 107830005 107801117 4338276 100193229 123157225 123147392 123165933 123410613 8070130 110429933 100821323 5717342
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