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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   ARF3   ADP-ribosylation factor 3 
 ath-u.5   ARF3   ADP-ribosylation factor 3 
 ath-r.7   ARF3   ADP-ribosylation factor 3 
 ath-m.9   ARF3   ADP-ribosylation factor 3 
 ath-e.2   ARF3   ADP-ribosylation factor 3 
 ath-m.4.bio   ARF3   ADP-ribosylation factor 3 
 ath-m.4.hor   ARF3   ADP-ribosylation factor 3 
 ath-m.4.lig   ARF3   ADP-ribosylation factor 3 
 ath-m.4.tis   ARF3   ADP-ribosylation factor 3 
 bra-r.6   103864586   ADP-ribosylation factor 1 
 bra-r.6   103851569   ADP-ribosylation factor 1 
 bra-r.6   103842229   ADP-ribosylation factor 1 
 bna-r.1   111215056   ADP-ribosylation factor 1 
 bna-r.1   106375401   ADP-ribosylation factor 1 
 bna-r.1   106354741   ADP-ribosylation factor 1-like 
 ghi-r.1   107907472   ADP-ribosylation factor 1 
 ghi-r.1   107958689   ADP-ribosylation factor 1 
 ghi-r.1   107937899   ADP-ribosylation factor 3 
 cit-r.1   102621374   ADP-ribosylation factor 1 
 cit-r.1   102610299   ADP-ribosylation factor 1 
 gma-u.5   100815426   ADP-ribosylation factor 1 
 gma-u.5   100805153   ADP-ribosylation factor 1-like 
 vvi-u.5   100241677   ADP-ribosylation factor 1 
 vvi-u.5   100249651   ADP-ribosylation factor 1 
 ppo-u.5   18100535   ADP-ribosylation factor 1 
 ppo-u.5   7459901   ADP-ribosylation factor 1 
 ppo-u.5   7488995   ADP-ribosylation factor 1 
 mtr-u.5   11428372   ADP-ribosylation factor 1 
 sly-u.5   101266344   ADP-ribosylation factor 1 
 sot-r.1   102582483   ADP-ribosylation factor 1 
 nta-r.1   107761870   ADP-ribosylation factor 1 
 nta-r.1   107803723   ADP-ribosylation factor 1 
 osa-u.5   4345072   ADP-ribosylation factor 3 
 zma-u.5   100191298   uncharacterized LOC100191298 
 tae-r.2   123170069   ADP-ribosylation factor 3 
 tae-r.2   123154214   ADP-ribosylation factor 3 
 tae-r.2   123161757   ADP-ribosylation factor 3 
 hvu-r.1   123407043   ADP-ribosylation factor 3 
 sbi-r.1   8067937   ADP-ribosylation factor 3 
 bdi-r.1   100825312   ADP-ribosylation factor 3 
 cre-r.1   CHLRE_12g535900v5   uncharacterized protein 

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Top 50 coexpressed genes to ARF3 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ARF3 (ath-m.4.str coexpression data)

CoexMap"817014"


athARF3 | Entrez gene ID : 817014      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 3 3 3 2 2 2 3 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005795 [list] [network] Golgi stack  (193 genes)  IDA  
GO:0005794 [list] [network] Golgi apparatus  (1198 genes)  ISM  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  HDA  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001077955.1 [sequence] [blastp]
NP_850057.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  cyto 2,  chlo_mito 2,  nucl 1,  cyto_plas 1  (predict for NP_001077955.1)
cyto 4,  chlo 2,  chlo_mito 2,  cyto_plas 2,  mito 1,  cyto_pero 1,  cyto_E.R. 1  (predict for NP_850057.1)
Subcellular
localization
TargetP
other 5,  scret 3  (predict for NP_001077955.1)
other 5,  scret 3  (predict for NP_850057.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
ARF3
ath-u.5
for
ARF3
ath-r.7
for
ARF3
ath-m.9
for
ARF3
ath-e.2
for
ARF3
ath-m.4.bio
for
ARF3
ath-m.4.hor
for
ARF3
ath-m.4.lig
for
ARF3
ath-m.4.tis
for
ARF3
bra-r.6
for
103864586
bra-r.6
for
103851569
bra-r.6
for
103842229
bna-r.1
for
111215056
bna-r.1
for
106375401
bna-r.1
for
106354741
ghi-r.1
for
107907472
ghi-r.1
for
107958689
ghi-r.1
for
107937899
cit-r.1
for
102621374
cit-r.1
for
102610299
gma-u.5
for
100815426
gma-u.5
for
100805153
vvi-u.5
for
100241677
vvi-u.5
for
100249651
ppo-u.5
for
18100535
ppo-u.5
for
7459901
ppo-u.5
for
7488995
mtr-u.5
for
11428372
sly-u.5
for
101266344
sot-r.1
for
102582483
nta-r.1
for
107761870
nta-r.1
for
107803723
osa-u.5
for
4345072
zma-u.5
for
100191298
tae-r.2
for
123170069
tae-r.2
for
123154214
tae-r.2
for
123161757
hvu-r.1
for
123407043
sbi-r.1
for
8067937
bdi-r.1
for
100825312
cre-r.1
for
CHLRE_12g535900v5


Ortholog ID: 4871
Species ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol ARF3 LOC103864586 LOC103851569 LOC103842229 LOC106354741 LOC106391079 LOC106368595 LOC107937899 LOC107920520 LOC107909202 LOC102621374 LOC102610299 LOC100815426 LOC100805153 LOC100241677 LOC100249651 LOC18100535 LOC7459901 LOC7476225 LOC11428372 LOC101266344 LOC102582483 LOC107761870 LOC107803723 LOC4345072 LOC100191298 LOC123170069 LOC123154214 LOC123161757 LOC123407043 LOC8067937 LOC100825312 CHLRE_12g535900v5
Function* ADP-ribosylation factor 3 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1-like ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 3 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1-like ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 1 ADP-ribosylation factor 3 uncharacterized LOC100191298 ADP-ribosylation factor 3 ADP-ribosylation factor 3 ADP-ribosylation factor 3 ADP-ribosylation factor 3 ADP-ribosylation factor 3 ADP-ribosylation factor 3 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath04141 Protein processing in endoplasmic reticulum 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra03018 RNA degradation 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03060 Protein export 8
bna04144 Endocytosis 3
bna04517 IgSF CAM signaling 3
bna05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 4
cit04130 SNARE interactions in vesicular transport 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 3
ppo04120 Ubiquitin mediated proteolysis 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 3
ppo04144 Endocytosis 2
ppo04145 Phagosome 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04145 Phagosome 7
mtr04517 IgSF CAM signaling 7
mtr04814 Motor proteins 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00510 N-Glycan biosynthesis 3
sly00513 Various types of N-glycan biosynthesis 3
sly04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 2
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00562 Inositol phosphate metabolism 2
sbi04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 5
bdi04142 Lysosome 2
bdi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 4
cre04145 Phagosome 4
cre04141 Protein processing in endoplasmic reticulum 2
cre04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 817014 103864586 103851569 103842229 106354741 106391079 106368595 107937899 107920520 107909202 102621374 102610299 100815426 100805153 100241677 100249651 18100535 7459901 7476225 11428372 101266344 102582483 107761870 107803723 4345072 100191298 123170069 123154214 123161757 123407043 8067937 100825312 5718492
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