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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   ELF4   EARLY FLOWERING-like protein (DUF1313) 
 ath-u.5   ELF4   EARLY FLOWERING-like protein (DUF1313) 
 ath-r.7   ELF4   EARLY FLOWERING-like protein (DUF1313) 
 ath-m.9   ELF4   EARLY FLOWERING-like protein (DUF1313) 
 ath-e.2   ELF4   EARLY FLOWERING-like protein (DUF1313) 
 ath-m.4.bio   ELF4   EARLY FLOWERING-like protein (DUF1313) 
 ath-m.4.hor   ELF4   EARLY FLOWERING-like protein (DUF1313) 
 ath-m.4.lig   ELF4   EARLY FLOWERING-like protein (DUF1313) 
 ath-m.4.tis   ELF4   EARLY FLOWERING-like protein (DUF1313) 
 bra-r.6   103866985   protein EARLY FLOWERING 4 
 bra-r.6   103865763   protein EARLY FLOWERING 4 
 bra-r.6   103858263   protein ELF4-LIKE 1 
 bna-r.1   106454592   protein EARLY FLOWERING 4 
 bna-r.1   111207604   protein ELF4-LIKE 1 
 bna-r.1   106450265   protein EARLY FLOWERING 4-like 
 ghi-r.1   107931853   protein EARLY FLOWERING 4 
 ghi-r.1   107906621   protein ELF4-LIKE 1 
 ghi-r.1   107943760   protein EARLY FLOWERING 4 
 cit-r.1   127900831   protein EARLY FLOWERING 4-like 
 cit-r.1   102621432   protein ELF4-LIKE 1-like 
 cit-r.1   102630880   protein EARLY FLOWERING 4 
 gma-u.5   ELF4A   protein EARLY FLOWERING 4a 
 gma-u.5   ELF4B   protein EARLY FLOWERING 4b 
 gma-u.5   100793086   protein ELF4-LIKE 1 
 vvi-u.5   100253526   protein EARLY FLOWERING 4 
 ppo-u.5   7467995   protein ELF4-LIKE 1 
 ppo-u.5   7494492   protein EARLY FLOWERING 4 
 mtr-u.5   11419032   protein EARLY FLOWERING 4 
 sly-u.5   101267898   protein EARLY FLOWERING 4 
 sly-u.5   101264785   protein EARLY FLOWERING 4-like 
 sot-r.1   102589345   protein EARLY FLOWERING 4-like 
 sot-r.1   102603103   protein EARLY FLOWERING 4-like 
 sot-r.1   107060485   protein EARLY FLOWERING 4-like 
 nta-r.1   107775420   protein ELF4-LIKE 3-like 
 nta-r.1   107783968   protein EARLY FLOWERING 4-like 

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Top 50 coexpressed genes to ELF4 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ELF4 (ath-m.4.str coexpression data)

CoexMap"818596"


athELF4 | Entrez gene ID : 818596      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta sbi cre tae zma osa bdi hvu
Paralog 9 3 3 3 3 3 1 2 1 2 3 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009649 [list] [network] entrainment of circadian clock  (12 genes)  IMP  
GO:0042753 [list] [network] positive regulation of circadian rhythm  (12 genes)  IMP  
GO:0010017 [list] [network] red or far-red light signaling pathway  (53 genes)  IMP  
GO:0010114 [list] [network] response to red light  (73 genes)  IMP  
GO:0048573 [list] [network] photoperiodism, flowering  (77 genes)  IMP  
GO:0009648 [list] [network] photoperiodism  (91 genes)  IEP IMP  
GO:0009909 [list] [network] regulation of flower development  (163 genes)  IMP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0042803 [list] [network] protein homodimerization activity  (237 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_565922.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 7,  cyto_nucl 4,  cyto 1  (predict for NP_565922.1)
Subcellular
localization
TargetP
other 7  (predict for NP_565922.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
ELF4
ath-u.5
for
ELF4
ath-r.7
for
ELF4
ath-m.9
for
ELF4
ath-e.2
for
ELF4
ath-m.4.bio
for
ELF4
ath-m.4.hor
for
ELF4
ath-m.4.lig
for
ELF4
ath-m.4.tis
for
ELF4
bra-r.6
for
103866985
bra-r.6
for
103865763
bra-r.6
for
103858263
bna-r.1
for
106454592
bna-r.1
for
111207604
bna-r.1
for
106450265
ghi-r.1
for
107931853
ghi-r.1
for
107906621
ghi-r.1
for
107943760
cit-r.1
for
127900831
cit-r.1
for
102621432
cit-r.1
for
102630880
gma-u.5
for
ELF4A
gma-u.5
for
ELF4B
gma-u.5
for
100793086
vvi-u.5
for
100253526
ppo-u.5
for
7467995
ppo-u.5
for
7494492
mtr-u.5
for
11419032
sly-u.5
for
101267898
sly-u.5
for
101264785
sot-r.1
for
102589345
sot-r.1
for
102603103
sot-r.1
for
107060485
nta-r.1
for
107775420
nta-r.1
for
107783968


Ortholog ID: 4690
Species ath bra bra bra bna bna bna ghi ghi ghi cit cit cit gma gma gma vvi ppo ppo mtr sly sly sot sot sot nta nta
Symbol ELF4 LOC103866985 LOC103865763 LOC103858263 LOC106454592 LOC106450265 LOC106399325 LOC107906621 LOC121218578 LOC107900443 LOC127900831 LOC102621432 LOC102630880 ELF4A ELF4B LOC100793086 LOC100253526 LOC7467995 LOC7494492 LOC11419032 LOC101267898 LOC101264785 LOC102589345 LOC102603103 LOC107060485 LOC107775420 LOC107783968
Function* EARLY FLOWERING-like protein (DUF1313) protein EARLY FLOWERING 4 protein EARLY FLOWERING 4 protein ELF4-LIKE 1 protein EARLY FLOWERING 4 protein EARLY FLOWERING 4-like protein EARLY FLOWERING 4-like protein ELF4-LIKE 1 protein EARLY FLOWERING 4 protein EARLY FLOWERING 4 protein EARLY FLOWERING 4-like protein ELF4-LIKE 1-like protein EARLY FLOWERING 4 protein EARLY FLOWERING 4a protein EARLY FLOWERING 4b protein ELF4-LIKE 1 protein EARLY FLOWERING 4 protein ELF4-LIKE 1 protein EARLY FLOWERING 4 protein EARLY FLOWERING 4 protein EARLY FLOWERING 4 protein EARLY FLOWERING 4-like protein EARLY FLOWERING 4-like protein EARLY FLOWERING 4-like protein EARLY FLOWERING 4-like protein ELF4-LIKE 3-like protein EARLY FLOWERING 4-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 3
ghi04145 Phagosome 3
ghi04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04712 Circadian rhythm - plant 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00730 Thiamine metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00195 Photosynthesis 3
cit00860 Porphyrin metabolism 2
cit01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04712 Circadian rhythm - plant 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
gma04712 Circadian rhythm - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04712 Circadian rhythm - plant 3
ppo04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 7
sot01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04712 Circadian rhythm - plant 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 818596 103866985 103865763 103858263 106454592 106450265 106399325 107906621 121218578 107900443 127900831 102621432 102630880 100802905 100796686 100793086 100253526 7467995 7494492 11419032 101267898 101264785 102589345 102603103 107060485 107775420 107783968
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