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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   SPL9   squamosa promoter binding protein-like 9 
 ath-u.5   SPL9   squamosa promoter binding protein-like 9 
 ath-r.7   SPL9   squamosa promoter binding protein-like 9 
 ath-m.9   SPL9   squamosa promoter binding protein-like 9 
 ath-e.2   SPL9   squamosa promoter binding protein-like 9 
 ath-m.4.bio   SPL9   squamosa promoter binding protein-like 9 
 ath-m.4.hor   SPL9   squamosa promoter binding protein-like 9 
 ath-m.4.lig   SPL9   squamosa promoter binding protein-like 9 
 ath-m.4.tis   SPL9   squamosa promoter binding protein-like 9 
 ath-u.5   SPL8   squamosa promoter binding protein-like 8 
 ath-u.5   AT1G69170   Squamosa promoter-binding protein-like (SBP domain) transcription factor family protein 
 ath-u.5   SPL4   squamosa promoter binding protein-like 4 
 bra-r.6   103830125   squamosa promoter-binding protein-like 15 
 ghi-r.1   107921105   squamosa promoter-binding-like protein 13A 
 ghi-r.1   107923989   squamosa promoter-binding-like protein 8 
 ghi-r.1   107917040   squamosa promoter-binding protein 1 
 cit-r.1   102618573   squamosa promoter-binding-like protein 3 
 cit-r.1   102607798   squamosa promoter-binding protein 1-like 
 cit-r.1   102628358   squamosa promoter-binding-like protein 7 
 gma-u.5   100806582   squamosa promoter-binding-like protein 7 
 gma-u.5   102664649   squamosa promoter-binding-like protein 13A 
 gma-u.5   100805328   squamosa promoter-binding-like protein 13A 
 vvi-u.5   100255434   squamosa promoter-binding-like protein 3 
 vvi-u.5   100257602   squamosa promoter-binding-like protein 3 
 vvi-u.5   100250271   squamosa promoter-binding protein 1 
 ppo-u.5   18105162   squamosa promoter-binding-like protein 7 
 ppo-u.5   7460558   squamosa promoter-binding-like protein 16 
 ppo-u.5   7460811   squamosa promoter-binding-like protein 4 
 mtr-u.5   11431467   squamosa promoter-binding-like protein 8 
 mtr-u.5   11430800   squamosa promoter-binding-like protein 9 
 sly-u.5   101250753   squamosa promoter-binding-like protein 9 
 sly-u.5   SPL-CNR   SQUAMOSA promoter binding protein-like 
 sly-u.5   101267454   squamosa promoter-binding-like protein 8 
 sot-r.1   102594116   squamosa promoter-binding-like protein 3 
 sot-r.1   102591509   squamosa promoter-binding-like protein 8 
 nta-r.1   107762327   squamosa promoter-binding-like protein 4 
 nta-r.1   107817110   squamosa promoter-binding-like protein 9 
 nta-r.1   107817617   squamosa promoter-binding-like protein 9 
 osa-u.5   9266075   squamosa promoter-binding-like protein 17 
 osa-u.5   9270355   squamosa promoter-binding-like protein 13 
 osa-u.5   4336597   squamosa promoter-binding-like protein 7 
 zma-u.5   sbp21   SBP-transcription factor 21 
 zma-u.5   sbp5   SBP-transcription factor 5 
 zma-u.5   sbp3   SBP-transcription factor 3 
 tae-r.2   123052590   squamosa promoter-binding-like protein 13 
 hvu-r.1   123399776   squamosa promoter-binding-like protein 18 
 hvu-r.1   123445251   squamosa promoter-binding-like protein 2 
 hvu-r.1   123399406   squamosa promoter-binding-like protein 17 
 sbi-r.1   8064025   squamosa promoter-binding-like protein 14 
 sbi-r.1   8080721   squamosa promoter-binding-like protein 13 
 sbi-r.1   8079806   squamosa promoter-binding-like protein 2 
 bdi-r.1   100824643   squamosa promoter-binding-like protein 17 
 bdi-r.1   100823130   squamosa promoter-binding-like protein 7 
 bdi-r.1   100823377   squamosa promoter-binding-like protein 4 
 cre-r.1   CHLRE_06g300600v5   uncharacterized protein 
 cre-r.1   CHLRE_02g104700v5   uncharacterized protein 
 cre-r.1   CHLRE_07g345050v5   uncharacterized protein 

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Top 50 coexpressed genes to SPL9 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SPL9 (ath-m.4.str coexpression data)

CoexMap""


athSPL9 | Entrez gene ID : 818820      
Species ath bra ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre bna
Paralog 12 1 3 3 3 3 3 2 3 2 3 3 3 1 3 3 3 3 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
Function squamosa promoter binding protein-like 9
KEGG
GO BP
GO:2000025 [list] [network] regulation of leaf formation  (2 genes)  IMP  
GO:0048653 [list] [network] anther development  (81 genes)  IGI  
GO:0010228 [list] [network] vegetative to reproductive phase transition of meristem  (186 genes)  IGI  
GO:0048366 [list] [network] leaf development  (371 genes)  IDA IMP  
GO:0009409 [list] [network] response to cold  (436 genes)  IEP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0000981 [list] [network] DNA-binding transcription factor activity, RNA polymerase II-specific  (47 genes)  IPI  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_181749.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_181749.1)
Subcellular
localization
TargetP
other 7,  chlo 5  (predict for NP_181749.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
SPL9
ath-u.5
for
SPL9
ath-r.7
for
SPL9
ath-m.9
for
SPL9
ath-e.2
for
SPL9
ath-m.4.bio
for
SPL9
ath-m.4.hor
for
SPL9
ath-m.4.lig
for
SPL9
ath-m.4.tis
for
SPL9
ath-u.5
for
SPL8
ath-u.5
for
AT1G69170
ath-u.5
for
SPL4
bra-r.6
for
103830125
ghi-r.1
for
107921105
ghi-r.1
for
107923989
ghi-r.1
for
107917040
cit-r.1
for
102618573
cit-r.1
for
102607798
cit-r.1
for
102628358
gma-u.5
for
100806582
gma-u.5
for
102664649
gma-u.5
for
100805328
vvi-u.5
for
100255434
vvi-u.5
for
100257602
vvi-u.5
for
100250271
ppo-u.5
for
18105162
ppo-u.5
for
7460558
ppo-u.5
for
7460811
mtr-u.5
for
11431467
mtr-u.5
for
11430800
sly-u.5
for
101250753
sly-u.5
for
SPL-CNR
sly-u.5
for
101267454
sot-r.1
for
102594116
sot-r.1
for
102591509
nta-r.1
for
107762327
nta-r.1
for
107817110
nta-r.1
for
107817617
osa-u.5
for
9266075
osa-u.5
for
9270355
osa-u.5
for
4336597
zma-u.5
for
sbp21
zma-u.5
for
sbp5
zma-u.5
for
sbp3
tae-r.2
for
123052590
hvu-r.1
for
123399776
hvu-r.1
for
123445251
hvu-r.1
for
123399406
sbi-r.1
for
8064025
sbi-r.1
for
8080721
sbi-r.1
for
8079806
bdi-r.1
for
100824643
bdi-r.1
for
100823130
bdi-r.1
for
100823377
cre-r.1
for
CHLRE_06g300600v5
cre-r.1
for
CHLRE_02g104700v5
cre-r.1
for
CHLRE_07g345050v5

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Ortholog ID: 89
Species ath bra bra bna bna ghi ghi ghi cit cit cit gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sly sot sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi sbi bdi bdi bdi cre cre cre
Symbol SPL4 LOC103868453 LOC103865930 LOC111215130 LOC106370056 LOC107923989 LOC107924238 LOC107938840 LOC102628358 LOC102620002 LOC102616706 LOC100789055 LOC100305703 LOC100257602 LOC100253723 LOC18103048 LOC7454733 LOC7456784 LOC11431467 LOC25502503 LOC101250753 SPL-CNR LOC101266455 LOC102594116 LOC102591509 LOC102581816 LOC107811347 LOC142161672 LOC4328461 LOC4346133 LOC103650833 sbp23 LOC123167761 LOC123121932 LOC123445251 LOC123407106 LOC8064025 LOC8060951 LOC8075819 LOC100824643 LOC100823377 LOC100841788 CHLRE_06g300600v5 CHLRE_02g104700v5 CHLRE_07g345050v5
Function* squamosa promoter binding protein-like 4 squamosa promoter-binding-like protein 5 squamosa promoter-binding-like protein 9 squamosa promoter-binding-like protein 9 squamosa promoter-binding-like protein 8 squamosa promoter-binding-like protein 8 squamosa promoter-binding-like protein 13A squamosa promoter-binding-like protein 9 squamosa promoter-binding-like protein 7 teosinte glume architecture 1-like squamosa promoter-binding-like protein 8 squamosa promoter-binding protein 1-like squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 3 promoter-binding protein SPL9 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 13A squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 8 squamosa promoter-binding protein 1 squamosa promoter-binding-like protein 9 SQUAMOSA promoter binding protein-like squamosa promoter-binding-like protein 8 squamosa promoter-binding-like protein 3 squamosa promoter-binding-like protein 8 squamosa promoter-binding protein 1-like squamosa promoter-binding protein 1 squamosa promoter-binding-like protein 8 squamosa promoter-binding-like protein 4 squamosa promoter-binding-like protein 16 squamosa promoter-binding-like protein 2 SBP-transcription factor 23 squamosa promoter-binding-like protein 16 squamosa promoter-binding-like protein 17 squamosa promoter-binding-like protein 2 squamosa promoter-binding-like protein 17 squamosa promoter-binding-like protein 14 teosinte glume architecture 1 putative squamosa promoter-binding-like protein 19 squamosa promoter-binding-like protein 17 squamosa promoter-binding-like protein 4 squamosa promoter-binding-like protein 8 uncharacterized protein uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00030 Pentose phosphate pathway 5
bna01200 Carbon metabolism 5
bna00073 Cutin, suberine and wax biosynthesis 4
bna00270 Cysteine and methionine metabolism 2
bna00062 Fatty acid elongation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00230 Purine metabolism 2
ghi00240 Pyrimidine metabolism 2
ghi00760 Nicotinate and nicotinamide metabolism 2
ghi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00561 Glycerolipid metabolism 2
cit00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma00904 Diterpenoid biosynthesis 2
gma00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 2
gma00513 Various types of N-glycan biosynthesis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04016 MAPK signaling pathway - plant 5
vvi04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
ppo00592 alpha-Linolenic acid metabolism 2
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00073 Cutin, suberine and wax biosynthesis 3
nta00511 Other glycan degradation 2
nta04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 3
osa00480 Glutathione metabolism 3
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 3
sbi03082 ATP-dependent chromatin remodeling 2
sbi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi02010 ABC transporters 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841749 103868453 103865930 111215130 106370056 107923989 107924238 107938840 102628358 102620002 102616706 100789055 100305703 100257602 100253723 18103048 7454733 7456784 11431467 25502503 101250753 101256245 101266455 102594116 102591509 102581816 107811347 142161672 4328461 4346133 103650833 100217104 123167761 123121932 123445251 123407106 8064025 8060951 8075819 100824643 100823377 100841788 5716977 5725317 5718132
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