Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT3G50570   hydroxyproline-rich glycoprotein family protein 
 ath-u.5   AT3G50570   hydroxyproline-rich glycoprotein family protein 
 ath-r.7   AT3G50570   hydroxyproline-rich glycoprotein family protein 
 ath-m.9   AT3G50570   hydroxyproline-rich glycoprotein family protein 
 ath-e.2   AT3G50570   hydroxyproline-rich glycoprotein family protein 
 ath-m.4.bio   AT3G50570   hydroxyproline-rich glycoprotein family protein 
 ath-m.4.hor   AT3G50570   hydroxyproline-rich glycoprotein family protein 
 ath-m.4.lig   AT3G50570   hydroxyproline-rich glycoprotein family protein 
 ath-m.4.tis   AT3G50570   hydroxyproline-rich glycoprotein family protein 
 bra-r.6   103840961   inverted formin-2 
 bna-r.1   106378804   branchpoint-bridging protein-like 
 bna-r.1   106415636   pre-mRNA polyadenylation factor FIP1-like 

close


Top 50 coexpressed genes to AT3G50570 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G50570 (ath-m.4.str coexpression data)

CoexMap"824221"


athAT3G50570 | Entrez gene ID : 824221      
Species ath bra bna osa sot sly cit ppo ghi bdi sbi gma mtr tae hvu vvi zma cre nta
Paralog 9 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001327871.1 [sequence] [blastp]
NP_190626.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 4,  chlo 2,  vacu 2,  plas 1,  E.R. 1,  E.R._plas 1  (predict for NP_001327871.1)
extr 6,  vacu 2,  cyto 1  (predict for NP_190626.1)
Subcellular
localization
TargetP
scret 2  (predict for NP_001327871.1)
chlo 4  (predict for NP_190626.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT3G50570
ath-u.5
for
AT3G50570
ath-r.7
for
AT3G50570
ath-m.9
for
AT3G50570
ath-e.2
for
AT3G50570
ath-m.4.bio
for
AT3G50570
ath-m.4.hor
for
AT3G50570
ath-m.4.lig
for
AT3G50570
ath-m.4.tis
for
AT3G50570
bra-r.6
for
103840961
bna-r.1
for
106378804
bna-r.1
for
106415636


Ortholog ID: 20678
Species ath bra bna bna
Symbol AT3G50570 LOC103840961 LOC106378804 LOC106415636
Function* hydroxyproline-rich glycoprotein family protein inverted formin-2 branchpoint-bridging protein-like pre-mRNA polyadenylation factor FIP1-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 3
bra00941 Flavonoid biosynthesis 2
bra00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824221 103840961 106378804 106415636
The preparation time of this page was 0.1 [sec].