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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str  AT3G56880  VQ motif-containing protein 
 ath-u.5  AT3G56880  VQ motif-containing protein 
 ath-r.7  AT3G56880  VQ motif-containing protein 
 ath-m.9  AT3G56880  VQ motif-containing protein 
 ath-e.2  AT3G56880  VQ motif-containing protein 
 ath-m.4.bio  AT3G56880  VQ motif-containing protein 
 ath-m.4.hor  AT3G56880  VQ motif-containing protein 
 ath-m.4.lig  AT3G56880  VQ motif-containing protein 
 ath-m.4.tis  AT3G56880  VQ motif-containing protein 
 ath-u.5  CAMBP25  calmodulin (CAM)-binding protein of 25 kDa 
 bra-r.6  103865857  calmodulin-binding protein 25 
 bra-r.6  103863082  calmodulin-binding protein 25-like 
 bra-r.6  103841587  calmodulin-binding protein 25 
 bna-r.1  111213630  calmodulin-binding protein 25-like 
 bna-r.1  106368045  calmodulin-binding protein 25-like 
 bna-r.1  111214987  calmodulin-binding protein 25-like 
 ghi-r.1  107925716  calmodulin-binding protein 25 
 ghi-r.1  107922658  calmodulin-binding protein 25 
 cit-r.1  102616903  calmodulin-binding protein 25-like 
 gma-u.5  100790912  calmodulin-binding protein 25 
 gma-u.5  100782392  calmodulin-binding protein 25 
 vvi-u.5  100255095  calmodulin-binding protein 25 
 ppo-u.5  7464058  calmodulin-binding protein 25 
 ppo-u.5  7479642  calmodulin-binding protein 25 
 mtr-u.5  11415019  calmodulin-binding protein 25 
 sly-u.5  101251527  calmodulin-binding protein 25 
 sly-u.5  101259793  calmodulin-binding protein 25 
 sot-r.1  102604159  calmodulin-binding protein 25 
 sot-r.1  107061384  calmodulin-binding protein 25-like 
 nta-r.1  107768131  calmodulin-binding protein 25-like 
 nta-r.1  107777975  calmodulin-binding protein 25-like 
 nta-r.1  107799294  calmodulin-binding protein 25-like 
 osa-u.5  112938650  calmodulin-binding protein 25 
 osa-u.5  4351394  calmodulin-binding protein 25 
 osa-u.5  4349677  calmodulin-binding protein 25 
 zma-u.5  100286374  VQ 
 zma-u.5  100280416  uncharacterized LOC100280416 
 hvu-r.1  123395856  calmodulin-binding protein 25-like 
 sbi-r.1  8071436  calmodulin-binding protein 25 
 sbi-r.1  8054669  calmodulin-binding protein 25 
 bdi-r.1  106866741  gametogenetin 
 bdi-r.1  104582548  translation initiation factor IF-2 

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Top 50 coexpressed genes to AT3G56880 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G56880 (ath-m.4.str coexpression data)

CoexMap"824855"


athAT3G56880 | Entrez gene ID : 824855
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma hvu sbi bdi tae cre
Paralog 10 3 3 2 1 2 1 2 1 2 2 3 3 2 1 2 2 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0071456 [list] [network] cellular response to hypoxia  (241 genes)  HEP  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_191247.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_191247.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for NP_191247.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT3G56880


ath-u.5
for
AT3G56880


ath-r.7
for
AT3G56880


ath-m.9
for
AT3G56880


ath-e.2
for
AT3G56880


ath-m.4.bio
for
AT3G56880


ath-m.4.hor
for
AT3G56880


ath-m.4.lig
for
AT3G56880


ath-m.4.tis
for
AT3G56880


ath-u.5
for
CAMBP25


bra-r.6
for
103865857


bra-r.6
for
103863082


bra-r.6
for
103841587


bna-r.1
for
111213630


bna-r.1
for
106368045


bna-r.1
for
111214987


ghi-r.1
for
107925716


ghi-r.1
for
107922658


cit-r.1
for
102616903


gma-u.5
for
100790912


gma-u.5
for
100782392


vvi-u.5
for
100255095


ppo-u.5
for
7464058


ppo-u.5
for
7479642


mtr-u.5
for
11415019


sly-u.5
for
101251527


sly-u.5
for
101259793


sot-r.1
for
102604159


sot-r.1
for
107061384


nta-r.1
for
107768131


nta-r.1
for
107777975


nta-r.1
for
107799294


osa-u.5
for
112938650


osa-u.5
for
4351394


osa-u.5
for
4349677


zma-u.5
for
100286374


zma-u.5
for
100280416


hvu-r.1
for
123395856


sbi-r.1
for
8071436


sbi-r.1
for
8054669


bdi-r.1
for
106866741


bdi-r.1
for
104582548



Ortholog ID: 3671
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr sly sly sot sot nta nta nta osa osa osa zma zma hvu sbi sbi bdi bdi
Symbol AT3G56880 CAMBP25 LOC103865857 LOC103863082 LOC103841587 LOC111213630 LOC106368045 LOC106391632 LOC121209480 LOC107922616 LOC107925958 LOC102616903 LOC100790912 LOC100782392 LOC100255095 LOC7464058 LOC7479642 LOC11415019 LOC101251527 LOC101259793 LOC102604159 LOC107061384 LOC107768131 LOC107777975 LOC107820476 LOC112938650 LOC4351394 LOC4349677 LOC100286374 LOC100280416 LOC123395856 LOC8071436 LOC8054669 LOC106866741 LOC104582548
Function* VQ motif-containing protein calmodulin (CAM)-binding protein of 25 kDa calmodulin-binding protein 25 calmodulin-binding protein 25-like calmodulin-binding protein 25 calmodulin-binding protein 25-like calmodulin-binding protein 25-like calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25-like calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25-like calmodulin-binding protein 25-like calmodulin-binding protein 25-like calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25 calmodulin-binding protein 25 VQ uncharacterized LOC100280416 calmodulin-binding protein 25-like calmodulin-binding protein 25 calmodulin-binding protein 25 gametogenetin translation initiation factor IF-2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 2
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00053 Ascorbate and aldarate metabolism 2
ghi00520 Amino sugar and nucleotide sugar metabolism 2
ghi01240 Biosynthesis of cofactors 2
ghi01250 Biosynthesis of nucleotide sugars 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
nta04130 SNARE interactions in vesicular transport 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04130 SNARE interactions in vesicular transport 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 6
zma01200 Carbon metabolism 5
zma01230 Biosynthesis of amino acids 5
zma00620 Pyruvate metabolism 3
zma00030 Pentose phosphate pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00730 Thiamine metabolism 3
sbi01240 Biosynthesis of cofactors 3
sbi00480 Glutathione metabolism 3
sbi01200 Carbon metabolism 3
sbi00020 Citrate cycle (TCA cycle) 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03060 Protein export 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 824855 818701 103865857 103863082 103841587 111213630 106368045 106391632 121209480 107922616 107925958 102616903 100790912 100782392 100255095 7464058 7479642 11415019 101251527 101259793 102604159 107061384 107768131 107777975 107820476 112938650 4351394 4349677 100286374 100280416 123395856 8071436 8054669 106866741 104582548
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