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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   BEE2   BR enhanced expression 2 
 ath-u.5   BEE2   BR enhanced expression 2 
 ath-r.7   BEE2   BR enhanced expression 2 
 ath-m.9   BEE2   BR enhanced expression 2 
 ath-e.2   BEE2   BR enhanced expression 2 
 ath-m.4.bio   BEE2   BR enhanced expression 2 
 ath-m.4.hor   BEE2   BR enhanced expression 2 
 ath-m.4.lig   BEE2   BR enhanced expression 2 
 ath-m.4.tis   BEE2   BR enhanced expression 2 
 ath-u.5   HBI1   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 bra-r.6   103874079   transcription factor HBI1 
 bra-r.6   103862477   transcription factor BEE 2 
 bra-r.6   103837851   transcription factor HBI1 
 bna-r.1   106432748   transcription factor HBI1-like 
 bna-r.1   106408608   transcription factor BEE 2-like 
 bna-r.1   106407005   transcription factor BEE 2-like 
 nta-r.1   107793736   uncharacterized LOC107793736 

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Top 50 coexpressed genes to BEE2 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to BEE2 (ath-m.4.str coexpression data)

CoexMap"829806"


athBEE2 | Entrez gene ID : 829806      
Species ath bra bna nta sbi ghi cre ppo mtr tae sly zma osa cit sot bdi gma hvu vvi
Paralog 10 3 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0045824 [list] [network] negative regulation of innate immune response  (24 genes)  IMP  
GO:0006351 [list] [network] DNA-templated transcription  (160 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003677 [list] [network] DNA binding  (1274 genes)  IDA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_195372.1 [sequence] [blastp]
NP_849508.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_195372.1)
nucl 10  (predict for NP_849508.1)
Subcellular
localization
TargetP
other 7  (predict for NP_195372.1)
other 7  (predict for NP_849508.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
BEE2
ath-u.5
for
BEE2
ath-r.7
for
BEE2
ath-m.9
for
BEE2
ath-e.2
for
BEE2
ath-m.4.bio
for
BEE2
ath-m.4.hor
for
BEE2
ath-m.4.lig
for
BEE2
ath-m.4.tis
for
BEE2
ath-u.5
for
HBI1
bra-r.6
for
103874079
bra-r.6
for
103862477
bra-r.6
for
103837851
bna-r.1
for
106432748
bna-r.1
for
106408608
bna-r.1
for
106407005
nta-r.1
for
107793736


Ortholog ID: 12177
Species ath ath bra bra bna bna nta
Symbol BEE2 HBI1 LOC103874079 LOC103837851 LOC106357812 LOC106345266 LOC107793736
Function* BR enhanced expression 2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor HBI1 transcription factor HBI1 transcription factor HBI1 transcription factor BEE 2-like uncharacterized LOC107793736
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829806 816346 103874079 103837851 106357812 106345266 107793736
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