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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-u.5   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-r.7   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-m.9   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-e.2   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-m.4.bio   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-m.4.hor   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-m.4.lig   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 ath-m.4.tis   ELF6   Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein 
 bra-r.6   103847317   probable lysine-specific demethylase ELF6 
 bna-r.1   106372678   probable lysine-specific demethylase ELF6 
 bna-r.1   125592306   probable lysine-specific demethylase ELF6 
 ghi-r.1   107957377   probable lysine-specific demethylase ELF6 
 ghi-r.1   107904076   probable lysine-specific demethylase ELF6 
 cit-r.1   102606975   lysine-specific demethylase ELF6 
 gma-u.5   100819845   probable lysine-specific demethylase ELF6 
 gma-u.5   100799861   probable lysine-specific demethylase ELF6 
 vvi-u.5   100256547   lysine-specific demethylase ELF6 
 ppo-u.5   7479874   lysine-specific demethylase ELF6 
 ppo-u.5   18102757   lysine-specific demethylase ELF6 
 mtr-u.5   11420302   probable lysine-specific demethylase ELF6 
 sly-u.5   101266411   lysine-specific demethylase ELF6 
 sot-r.1   102595804   probable lysine-specific demethylase ELF6 
 nta-r.1   107775759   lysine-specific demethylase ELF6 
 nta-r.1   107785352   lysine-specific demethylase ELF6 
 osa-u.5   9268736   probable lysine-specific demethylase SE14 
 zma-u.5   100381553   uncharacterized LOC100381553 
 tae-r.2   123093530   lysine-specific demethylase SE14 
 tae-r.2   123088161   lysine-specific demethylase SE14 
 hvu-r.1   123449830   lysine-specific demethylase SE14 
 sbi-r.1   8085469   lysine-specific demethylase SE14 
 bdi-r.1   100835298   lysine-specific demethylase SE14 

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Top 50 coexpressed genes to ELF6 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to ELF6 (ath-m.4.str coexpression data)

CoexMap"830303"


athELF6 | Entrez gene ID : 830303      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 2 1 1 1 2 1 1 2 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010219 [list] [network] regulation of vernalization response  (6 genes)  IMP  
GO:0048577 [list] [network] negative regulation of short-day photoperiodism, flowering  (7 genes)  IMP  
GO:0048579 [list] [network] negative regulation of long-day photoperiodism, flowering  (14 genes)  IMP  
GO:0010628 [list] [network] positive regulation of gene expression  (71 genes)  IMP  
GO:0009741 [list] [network] response to brassinosteroid  (101 genes)  IMP  
GO:0040029 [list] [network] epigenetic regulation of gene expression  (174 genes)  IMP  
GO:0009826 [list] [network] unidimensional cell growth  (310 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  TAS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  IDA ISM  
GO MF
GO:0071558 [list] [network] histone H3K27me2/H3K27me3 demethylase activity  (5 genes)  IDA IMP  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_196044.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  nucl 2,  chlo_mito 2,  cysk_nucl 1  (predict for NP_196044.2)
Subcellular
localization
TargetP
other 7  (predict for NP_196044.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
ELF6
ath-u.5
for
ELF6
ath-r.7
for
ELF6
ath-m.9
for
ELF6
ath-e.2
for
ELF6
ath-m.4.bio
for
ELF6
ath-m.4.hor
for
ELF6
ath-m.4.lig
for
ELF6
ath-m.4.tis
for
ELF6
bra-r.6
for
103847317
bna-r.1
for
106372678
bna-r.1
for
125592306
ghi-r.1
for
107957377
ghi-r.1
for
107904076
cit-r.1
for
102606975
gma-u.5
for
100819845
gma-u.5
for
100799861
vvi-u.5
for
100256547
ppo-u.5
for
7479874
ppo-u.5
for
18102757
mtr-u.5
for
11420302
sly-u.5
for
101266411
sot-r.1
for
102595804
nta-r.1
for
107775759
nta-r.1
for
107785352
osa-u.5
for
9268736
zma-u.5
for
100381553
tae-r.2
for
123093530
tae-r.2
for
123088161
hvu-r.1
for
123449830
sbi-r.1
for
8085469
bdi-r.1
for
100835298


Ortholog ID: 10273
Species ath bra bna bna ghi ghi cit gma gma vvi ppo ppo mtr sly sot nta nta osa zma tae tae hvu sbi bdi
Symbol ELF6 LOC103847317 LOC106372678 LOC125592306 LOC107957377 LOC107904076 LOC102606975 LOC100819845 LOC100799861 LOC100256547 LOC7479874 LOC18102757 LOC11420302 LOC101266411 LOC102595804 LOC107775759 LOC107785352 LOC9268736 LOC100381553 LOC123093530 LOC123088161 LOC123449830 LOC8085469 LOC100835298
Function* Zinc finger (C2H2 type) family protein / transcription factor jumonji (jmj) family protein probable lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 probable lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 lysine-specific demethylase ELF6 probable lysine-specific demethylase SE14 uncharacterized LOC100381553 lysine-specific demethylase SE14 lysine-specific demethylase SE14 lysine-specific demethylase SE14 lysine-specific demethylase SE14 lysine-specific demethylase SE14
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra00310 Lysine degradation 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
ghi04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 4
ghi00270 Cysteine and methionine metabolism 2
ghi04148 Efferocytosis 2
ghi04820 Cytoskeleton in muscle cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04120 Ubiquitin mediated proteolysis 2
sly03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00220 Arginine biosynthesis 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00910 Nitrogen metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 6
tae03013 Nucleocytoplasmic transport 3
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03015 mRNA surveillance pathway 3
tae03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 5
sbi03015 mRNA surveillance pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830303 103847317 106372678 125592306 107957377 107904076 102606975 100819845 100799861 100256547 7479874 18102757 11420302 101266411 102595804 107775759 107785352 9268736 100381553 123093530 123088161 123449830 8085469 100835298
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