ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.str	PA2	peroxidase 2
ath-u.5	PA2	peroxidase 2
ath-r.7	PA2	peroxidase 2
ath-m.9	PA2	peroxidase 2
ath-e.2	PA2	peroxidase 2
ath-m.4.bio	PA2	peroxidase 2
ath-m.4.hor	PA2	peroxidase 2
ath-m.4.lig	PA2	peroxidase 2
ath-m.4.tis	PA2	peroxidase 2
ath-u.5	AT5G06730	Peroxidase superfamily protein
ath-u.5	AT2G38380	Peroxidase superfamily protein
ath-u.5	AT2G38390	Peroxidase superfamily protein
bra-r.6	103857780	peroxidase 22
bra-r.6	103847010	peroxidase A2
bra-r.6	103847012	peroxidase A2
bna-r.1	106443612	peroxidase 22-like
bna-r.1	106403148	peroxidase C3
bna-r.1	106402880	peroxidase C3
ghi-r.1	107914313	peroxidase 15-like
ghi-r.1	107901996	peroxidase A2
ghi-r.1	107891250	peroxidase A2
cit-r.1	107174216	peroxidase E5-like
cit-r.1	102613627	peroxidase 15-like
gma-u.5	106794224	peroxidase A2
gma-u.5	100814455	peroxidase A2
gma-u.5	100782549	peroxidase A2
vvi-u.5	100260291	peroxidase A2
ppo-u.5	7483269	peroxidase A2
ppo-u.5	7455755	peroxidase A2
mtr-u.5	11407620	peroxidase E5
mtr-u.5	11410170	peroxidase 15
mtr-u.5	11426602	peroxidase 15
sly-u.5	101258436	peroxidase 15-like
sly-u.5	101254854	peroxidase A2
sly-u.5	101261260	lignin-forming anionic peroxidase
sot-r.1	102588050	lignin-forming anionic peroxidase-like
sot-r.1	102578391	peroxidase 15-like
nta-r.1	107830487	lignin-forming anionic peroxidase
nta-r.1	107788452	lignin-forming anionic peroxidase-like
nta-r.1	107792575	lignin-forming anionic peroxidase-like
osa-u.5	4347962	peroxidase A2
osa-u.5	4332174	peroxidase A2
zma-u.5	100282431	uncharacterized LOC100282431
zma-u.5	100216995	peroxidase 54
zma-u.5	100192603	Peroxidase 53
tae-r.2	123112512	peroxidase A2
tae-r.2	123098142	peroxidase A2-like
tae-r.2	123085240	peroxidase A2-like
hvu-r.1	123408723	peroxidase A2-like
sbi-r.1	8083642	peroxidase A2
sbi-r.1	8056835	peroxidase A2
bdi-r.1	100828063	peroxidase A2
bdi-r.1	100829768	peroxidase A2

Top 50 coexpressed genes to PA2 (ath-m.4.str coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to PA2 (ath-m.4.str coexpression data)

CoexMap"830561"

[Cytoscape]

Annotation

functional annotation

KEGG

ath00940 [list] [network] Phenylpropanoid biosynthesis (127 genes)

GO BP

GO:0002215 [list] [network] defense response to nematode	(6 genes)	IMP
GO:0009908 [list] [network] flower development	(378 genes)	IMP
GO:0006979 [list] [network] response to oxidative stress	(384 genes)	IEA

GO CC

GO:0005794 [list] [network] Golgi apparatus	(1198 genes)	HDA
GO:0005576 [list] [network] extracellular region	(3158 genes)	ISM

GO MF

Protein

NP_196290.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9

(predict for NP_196290.1)

Subcellular
localization
TargetP

scret 6

(predict for NP_196290.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.str for PA2	ath-u.5 for PA2	ath-r.7 for PA2	ath-m.9 for PA2	ath-e.2 for PA2	ath-m.4.bio for PA2	ath-m.4.hor for PA2	ath-m.4.lig for PA2	ath-m.4.tis for PA2	ath-u.5 for AT5G06730	ath-u.5 for AT2G38380	ath-u.5 for AT2G38390	bra-r.6 for 103857780	bra-r.6 for 103847010	bra-r.6 for 103847012	bna-r.1 for 106443612	bna-r.1 for 106403148	bna-r.1 for 106402880	ghi-r.1 for 107914313	ghi-r.1 for 107901996	ghi-r.1 for 107891250	cit-r.1 for 107174216	cit-r.1 for 102613627	gma-u.5 for 106794224	gma-u.5 for 100814455	gma-u.5 for 100782549	vvi-u.5 for 100260291	ppo-u.5 for 7483269	ppo-u.5 for 7455755	mtr-u.5 for 11407620	mtr-u.5 for 11410170	mtr-u.5 for 11426602	sly-u.5 for 101258436	sly-u.5 for 101254854	sly-u.5 for 101261260	sot-r.1 for 102588050	sot-r.1 for 102578391	nta-r.1 for 107830487	nta-r.1 for 107788452	nta-r.1 for 107792575	osa-u.5 for 4347962	osa-u.5 for 4332174	zma-u.5 for 100282431	zma-u.5 for 100216995	zma-u.5 for 100192603	tae-r.2 for 123112512	tae-r.2 for 123098142	tae-r.2 for 123085240	hvu-r.1 for 123408723	sbi-r.1 for 8083642	sbi-r.1 for 8056835	bdi-r.1 for 100828063	bdi-r.1 for 100829768

Ortholog

Ortholog ID: 629

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

PA2

CEVI-1

Function^*

peroxidase 2

Peroxidase superfamily protein

peroxidase A2

peroxidase C3

peroxidase 22-like

peroxidase A2

peroxidase 22

peroxidase 15-like

peroxidase A2

peroxidase E5-like

peroxidase A2

peroxidase 54-like

peroxidase A2

peroxidase 15

peroxidase E5

peroxidase A2

peroxidase E5

peroxidase 15-like

peroxidase A2

peroxidase

lignin-forming anionic peroxidase-like

peroxidase 15-like

lignin-forming anionic peroxidase-like

peroxidase 15-like

peroxidase A2

uncharacterized LOC100282431

Peroxidase 53

peroxidase A2

peroxidase A2-like

peroxidase A2

peroxidase A2-like

peroxidase A2

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	6
ath00460	Cyanoamino acid metabolism	2
ath00500	Starch and sucrose metabolism	2
ath00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	3
ath00073	Cutin, suberine and wax biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04141	Protein processing in endoplasmic reticulum	4
bra00630	Glyoxylate and dicarboxylate metabolism	2
bra00910	Nitrogen metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00073	Cutin, suberine and wax biosynthesis	2
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04016	MAPK signaling pathway - plant	2
bra00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00480	Glutathione metabolism	2
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00940	Phenylpropanoid biosynthesis	7
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00940	Phenylpropanoid biosynthesis	7
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	4
gma00562	Inositol phosphate metabolism	2
gma04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00940	Phenylpropanoid biosynthesis	3
ppo04075	Plant hormone signal transduction	2
ppo00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00460	Cyanoamino acid metabolism	2
ppo00500	Starch and sucrose metabolism	2
ppo00999	Biosynthesis of various plant secondary metabolites	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	9
mtr00943	Isoflavonoid biosynthesis	3
mtr00270	Cysteine and methionine metabolism	2
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	7
mtr00052	Galactose metabolism	2
mtr00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00480	Glutathione metabolism	2
sly00040	Pentose and glucuronate interconversions	2
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	5
sly04075	Plant hormone signal transduction	4
sly04626	Plant-pathogen interaction	3
sly00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	2
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	4
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00270	Cysteine and methionine metabolism	6
tae00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04145	Phagosome	4
sbi04517	IgSF CAM signaling	4
sbi04814	Motor proteins	4
sbi00909	Sesquiterpenoid and triterpenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	6

Expression

Expression pattern

Entrez Gene ID^*

830561

830562

818419

103847010

103865666

103865667

106436114

106419225

106436115

107914313

107901996

107891250

107174216

102614803

100783115

106796332

100812309

100260291

7455755

7461382

11407620

25483534

11426600

101258436

101254854

544084

102588050

102578391

107788452

107792575

107776863

4347962

4332174

100282431

100192603

123112512

123098142

123098140

123408723

8083642

8056835

100828063

100829768

The preparation time of this page was 0.1 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	12	3	3	3	2	3	1	2	3	3	2	3	2	3	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to PA2 (ath-m.4.str coexpression data)

Top 50 enrichment test to PA2 (ath-m.4.str coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**