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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT5G16030   mental retardation GTPase activating protein 
 ath-u.5   AT5G16030   mental retardation GTPase activating protein 
 ath-r.7   AT5G16030   mental retardation GTPase activating protein 
 ath-m.9   AT5G16030   mental retardation GTPase activating protein 
 ath-e.2   AT5G16030   mental retardation GTPase activating protein 
 ath-m.4.bio   AT5G16030   mental retardation GTPase activating protein 
 ath-m.4.hor   AT5G16030   mental retardation GTPase activating protein 
 ath-m.4.lig   AT5G16030   mental retardation GTPase activating protein 
 ath-m.4.tis   AT5G16030   mental retardation GTPase activating protein 
 ath-u.5   AT3G02500   mental retardation GTPase activating protein 
 bra-r.6   103846363   myelin transcription factor 1 
 bra-r.6   103851020   uncharacterized LOC103851020 
 bra-r.6   103856178   uncharacterized LOC103856178 
 bna-r.1   106372038   myelin transcription factor 1 
 bna-r.1   111204309   uncharacterized LOC111204309 
 bna-r.1   106424724   histone-lysine N-methyltransferase, H3 lysine-79 specific-like 
 ghi-r.1   107953445   uncharacterized LOC107953445 
 ghi-r.1   107916894   uncharacterized LOC107916894 
 ghi-r.1   107912716   uncharacterized LOC107912716 
 cit-r.1   102621023   hypothetical protein 
 gma-u.5   100804073   uncharacterized LOC100804073 
 gma-u.5   100786993   uncharacterized LOC100786993 
 gma-u.5   100780261   uncharacterized LOC100780261 
 vvi-u.5   100248073   uncharacterized LOC100248073 
 ppo-u.5   18107397   uncharacterized LOC18107397 
 ppo-u.5   7468365   uncharacterized LOC7468365 
 mtr-u.5   25497648   uncharacterized LOC25497648 
 mtr-u.5   25495609   uncharacterized LOC25495609 
 sly-u.5   101260301   uncharacterized LOC101260301 
 sly-u.5   101255558   uncharacterized LOC101255558 
 sot-r.1   102581404   uncharacterized LOC102581404 
 sot-r.1   102579386   uncharacterized LOC102579386 
 nta-r.1   107768391   uncharacterized LOC107768391 
 nta-r.1   107812088   uncharacterized LOC107812088 
 nta-r.1   107825040   uncharacterized LOC107825040 

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Top 50 coexpressed genes to AT5G16030 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G16030 (ath-m.4.str coexpression data)

CoexMap"831460"


athAT5G16030 | Entrez gene ID : 831460      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta sbi osa tae hvu zma cre bdi
Paralog 10 3 3 3 1 3 1 2 2 2 2 3 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001031889.1 [sequence] [blastp]
NP_001119233.1 [sequence] [blastp]
NP_001330659.1 [sequence] [blastp]
NP_001330660.1 [sequence] [blastp]
NP_568324.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for NP_001031889.1)
nucl 10  (predict for NP_001119233.1)
nucl 6,  mito 2,  chlo 1  (predict for NP_001330659.1)
nucl 10  (predict for NP_001330660.1)
nucl 10  (predict for NP_568324.1)
Subcellular
localization
TargetP
other 4,  mito 3  (predict for NP_001031889.1)
other 4,  mito 3  (predict for NP_001119233.1)
other 4,  mito 3  (predict for NP_001330659.1)
other 6  (predict for NP_001330660.1)
other 4,  mito 3  (predict for NP_568324.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT5G16030
ath-u.5
for
AT5G16030
ath-r.7
for
AT5G16030
ath-m.9
for
AT5G16030
ath-e.2
for
AT5G16030
ath-m.4.bio
for
AT5G16030
ath-m.4.hor
for
AT5G16030
ath-m.4.lig
for
AT5G16030
ath-m.4.tis
for
AT5G16030
ath-u.5
for
AT3G02500
bra-r.6
for
103846363
bra-r.6
for
103851020
bra-r.6
for
103856178
bna-r.1
for
106372038
bna-r.1
for
111204309
bna-r.1
for
106424724
ghi-r.1
for
107953445
ghi-r.1
for
107916894
ghi-r.1
for
107912716
cit-r.1
for
102621023
gma-u.5
for
100804073
gma-u.5
for
100786993
gma-u.5
for
100780261
vvi-u.5
for
100248073
ppo-u.5
for
18107397
ppo-u.5
for
7468365
mtr-u.5
for
25497648
mtr-u.5
for
25495609
sly-u.5
for
101260301
sly-u.5
for
101255558
sot-r.1
for
102581404
sot-r.1
for
102579386
nta-r.1
for
107768391
nta-r.1
for
107812088
nta-r.1
for
107825040


Ortholog ID: 6559
Species ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta
Symbol AT5G16030 AT3G02500 LOC103846363 LOC103851020 LOC103856178 LOC106424724 LOC106433138 LOC106354470 LOC107953445 LOC107916894 LOC107912716 LOC102621023 LOC100786993 LOC100780261 LOC100820045 LOC100248073 LOC18107397 LOC7468365 LOC25497648 LOC25495609 LOC101260301 LOC101255558 LOC102581404 LOC102579386 LOC107768391 LOC107825040 LOC107820732
Function* mental retardation GTPase activating protein mental retardation GTPase activating protein myelin transcription factor 1 uncharacterized LOC103851020 uncharacterized LOC103856178 histone-lysine N-methyltransferase, H3 lysine-79 specific-like hybrid signal transduction histidine kinase E-like uncharacterized LOC106354470 uncharacterized LOC107953445 uncharacterized LOC107916894 uncharacterized LOC107912716 hypothetical protein uncharacterized LOC100786993 uncharacterized LOC100780261 uncharacterized LOC100820045 uncharacterized LOC100248073 uncharacterized LOC18107397 uncharacterized LOC7468365 uncharacterized LOC25497648 uncharacterized LOC25495609 uncharacterized LOC101260301 uncharacterized LOC101255558 uncharacterized LOC102581404 uncharacterized LOC102579386 uncharacterized LOC107768391 uncharacterized LOC107825040 uncharacterized LOC107820732
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00511 Other glycan degradation 2
bna00600 Sphingolipid metabolism 2
bna04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00860 Porphyrin metabolism 3
gma00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
mtr04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04814 Motor proteins 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04517 IgSF CAM signaling 2
nta04518 Integrin signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00511 Other glycan degradation 3
nta00513 Various types of N-glycan biosynthesis 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta00531 Glycosaminoglycan degradation 2
nta00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 3
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04517 IgSF CAM signaling 2
nta04518 Integrin signaling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831460 821065 103846363 103851020 103856178 106424724 106433138 106354470 107953445 107916894 107912716 102621023 100786993 100780261 100820045 100248073 18107397 7468365 25497648 25495609 101260301 101255558 102581404 102579386 107768391 107825040 107820732
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