Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT5G18780   F-box/RNI-like superfamily protein 
 ath-u.5   AT5G18780   F-box/RNI-like superfamily protein 
 ath-r.7   AT5G18780   F-box/RNI-like superfamily protein 
 ath-m.9   AT5G18780   F-box/RNI-like superfamily protein 
 ath-e.2   AT5G18780   F-box/RNI-like superfamily protein 
 ath-m.4.bio   AT5G18780   F-box/RNI-like superfamily protein 
 ath-m.4.hor   AT5G18780   F-box/RNI-like superfamily protein 
 ath-m.4.lig   AT5G18780   F-box/RNI-like superfamily protein 
 ath-m.4.tis   AT5G18780   F-box/RNI-like superfamily protein 
 ath-u.5   AT5G18770   F-box/FBD-like domains containing protein 
 bra-r.6   103856344   FBD-associated F-box protein At5g18780 
 bna-r.1   106434043   F-box/FBD/LRR-repeat protein At5g18770-like 
 bna-r.1   106434053   F-box/FBD/LRR-repeat protein At5g18770-like 
 bna-r.1   106434062   F-box/FBD/LRR-repeat protein At5g18770-like 
 osa-u.5   4344661   F-box/FBD/LRR-repeat protein At1g80470 

close


Top 50 coexpressed genes to AT5G18780 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT5G18780 (ath-m.4.str coexpression data)

CoexMap"831996"


athAT5G18780 | Entrez gene ID : 831996      
Species ath bra bna osa sbi ghi cre ppo mtr tae sly zma cit sot bdi gma nta hvu vvi
Paralog 10 1 3 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
Protein NP_001190332.1 [sequence] [blastp]
NP_001329976.1 [sequence] [blastp]
NP_001329977.1 [sequence] [blastp]
NP_197379.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_001190332.1)
nucl 6,  cyto 4  (predict for NP_001329976.1)
nucl 6,  cyto 4  (predict for NP_001329977.1)
chlo 6,  nucl 2,  cyto 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  cyto_E.R. 1  (predict for NP_197379.1)
Subcellular
localization
TargetP
other 5,  mito 4  (predict for NP_001190332.1)
other 5,  mito 4  (predict for NP_001329976.1)
other 5,  mito 4  (predict for NP_001329977.1)
other 5,  mito 4  (predict for NP_197379.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT5G18780
ath-u.5
for
AT5G18780
ath-r.7
for
AT5G18780
ath-m.9
for
AT5G18780
ath-e.2
for
AT5G18780
ath-m.4.bio
for
AT5G18780
ath-m.4.hor
for
AT5G18780
ath-m.4.lig
for
AT5G18780
ath-m.4.tis
for
AT5G18780
ath-u.5
for
AT5G18770
bra-r.6
for
103856344
bna-r.1
for
106434043
bna-r.1
for
106434053
bna-r.1
for
106434062
osa-u.5
for
4344661


Ortholog ID: 10314
Species ath ath bra bna bna bna osa
Symbol AT5G18780 AT5G18770 LOC103856336 LOC106434053 LOC106434062 LOC106434073 LOC4344661
Function* F-box/RNI-like superfamily protein F-box/FBD-like domains containing protein F-box/FBD/LRR-repeat protein At5g18770 F-box/FBD/LRR-repeat protein At5g18770-like F-box/FBD/LRR-repeat protein At5g18770-like FBD-associated F-box protein At5g18780-like F-box/FBD/LRR-repeat protein At1g80470
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03410 Base excision repair 2
ath03430 Mismatch repair 2
ath03440 Homologous recombination 2
ath03450 Non-homologous end-joining 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 2
bna03015 mRNA surveillance pathway 2
bna00540 Lipopolysaccharide biosynthesis 2
bna03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 3
bna00540 Lipopolysaccharide biosynthesis 2
bna03410 Base excision repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 831996 831995 103856336 106434053 106434062 106434073 4344661
The preparation time of this page was 0.1 [sec].