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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT5G53110   RING/U-box superfamily protein 
 ath-u.5   AT5G53110   RING/U-box superfamily protein 
 ath-r.7   AT5G53110   RING/U-box superfamily protein 
 ath-m.9   AT5G53110   RING/U-box superfamily protein 
 ath-e.2   AT5G53110   RING/U-box superfamily protein 
 ath-m.4.bio   AT5G53110   RING/U-box superfamily protein 
 ath-m.4.hor   AT5G53110   RING/U-box superfamily protein 
 ath-m.4.lig   AT5G53110   RING/U-box superfamily protein 
 ath-m.4.tis   AT5G53110   RING/U-box superfamily protein 
 bra-r.6   103852056   RING-H2 finger protein ATL20 
 bra-r.6   103844790   RING-H2 finger protein ATL20 
 bna-r.1   106419382   RING-H2 finger protein ATL20 
 bna-r.1   106363362   RING-H2 finger protein ATL20-like 
 ghi-r.1   107903064   putative RING-H2 finger protein ATL21B 
 ghi-r.1   107909864   RING-H2 finger protein ATL20 
 ghi-r.1   107923725   putative RING-H2 finger protein ATL21A 
 gma-u.5   100810240   RING-H2 finger protein ATL20 
 gma-u.5   100818969   RING-H2 finger protein ATL20-like 
 gma-u.5   102661206   putative RING-H2 finger protein ATL21B 
 vvi-u.5   100244486   RING-H2 finger protein ATL20 
 vvi-u.5   100262465   putative RING-H2 finger protein ATL21A 
 ppo-u.5   7465317   RING-H2 finger protein ATL20 
 ppo-u.5   7467090   RING-H2 finger protein ATL20 
 mtr-u.5   25502192   putative RING-H2 finger protein ATL21A 
 mtr-u.5   25502189   RING-H2 finger protein ATL22 
 mtr-u.5   11421651   putative RING-H2 finger protein ATL21B 
 sly-u.5   101253066   RING-H2 finger protein ATL22 
 sly-u.5   101256794   putative RING-H2 finger protein ATL21A 
 sot-r.1   102588204   putative RING-H2 finger protein ATL21A 
 sot-r.1   102603520   RING-H2 finger protein ATL22-like 
 nta-r.1   107760680   RING-H2 finger protein ATL20 
 nta-r.1   107771750   putative RING-H2 finger protein ATL21A 
 nta-r.1   107767942   putative RING-H2 finger protein ATL21A 

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Top 50 coexpressed genes to AT5G53110 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT5G53110 (ath-m.4.str coexpression data)

CoexMap"835391"


athAT5G53110 | Entrez gene ID : 835391      
Species ath bra bna ghi gma vvi ppo mtr sly sot nta sbi cre tae zma osa cit bdi hvu
Paralog 9 2 2 3 3 2 2 3 2 2 3 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0030247 [list] [network] polysaccharide binding  (96 genes)  IEA  
Protein NP_200123.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 1,  nucl 1,  extr 1,  vacu 1,  cyto_mito 1,  mito_plas 1  (predict for NP_200123.2)
Subcellular
localization
TargetP
scret 9  (predict for NP_200123.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT5G53110
ath-u.5
for
AT5G53110
ath-r.7
for
AT5G53110
ath-m.9
for
AT5G53110
ath-e.2
for
AT5G53110
ath-m.4.bio
for
AT5G53110
ath-m.4.hor
for
AT5G53110
ath-m.4.lig
for
AT5G53110
ath-m.4.tis
for
AT5G53110
bra-r.6
for
103852056
bra-r.6
for
103844790
bna-r.1
for
106419382
bna-r.1
for
106363362
ghi-r.1
for
107903064
ghi-r.1
for
107909864
ghi-r.1
for
107923725
gma-u.5
for
100810240
gma-u.5
for
100818969
gma-u.5
for
102661206
vvi-u.5
for
100244486
vvi-u.5
for
100262465
ppo-u.5
for
7465317
ppo-u.5
for
7467090
mtr-u.5
for
25502192
mtr-u.5
for
25502189
mtr-u.5
for
11421651
sly-u.5
for
101253066
sly-u.5
for
101256794
sot-r.1
for
102588204
sot-r.1
for
102603520
nta-r.1
for
107760680
nta-r.1
for
107771750
nta-r.1
for
107767942


Ortholog ID: 5392
Species ath bra bra bna bna ghi ghi ghi cit gma gma gma vvi vvi ppo ppo mtr mtr mtr sly sly sot sot nta nta nta
Symbol AT5G53110 LOC103852056 LOC103844790 LOC106419382 LOC106413901 LOC107923725 LOC107950088 LOC107951185 LOC102610777 LOC100810240 LOC100818969 LOC102661206 LOC100244486 LOC100262465 LOC7465317 LOC7467090 LOC25502192 LOC25502189 LOC11421651 LOC101253066 LOC101256794 LOC102588204 LOC102603520 LOC107760680 LOC107771750 LOC107767942
Function* RING/U-box superfamily protein RING-H2 finger protein ATL20 RING-H2 finger protein ATL20 RING-H2 finger protein ATL20 RING-H2 finger protein ATL20 putative RING-H2 finger protein ATL21A RING-H2 finger protein ATL20 RING-H2 finger protein ATL20 putative RING-H2 finger protein ATL21A RING-H2 finger protein ATL20 RING-H2 finger protein ATL20-like putative RING-H2 finger protein ATL21B RING-H2 finger protein ATL20 putative RING-H2 finger protein ATL21A RING-H2 finger protein ATL20 RING-H2 finger protein ATL20 putative RING-H2 finger protein ATL21A RING-H2 finger protein ATL22 putative RING-H2 finger protein ATL21B RING-H2 finger protein ATL22 putative RING-H2 finger protein ATL21A putative RING-H2 finger protein ATL21A RING-H2 finger protein ATL22-like RING-H2 finger protein ATL20 putative RING-H2 finger protein ATL21A putative RING-H2 finger protein ATL21A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra02010 ABC transporters 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04626 Plant-pathogen interaction 4
bna00061 Fatty acid biosynthesis 2
bna00071 Fatty acid degradation 2
bna01212 Fatty acid metabolism 2
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00250 Alanine, aspartate and glutamate metabolism 6
ghi01230 Biosynthesis of amino acids 6
ghi00270 Cysteine and methionine metabolism 3
ghi00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04016 MAPK signaling pathway - plant 2
cit04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 4
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
gma00360 Phenylalanine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00360 Phenylalanine metabolism 2
gma00380 Tryptophan metabolism 2
gma04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 8
gma00380 Tryptophan metabolism 3
gma00860 Porphyrin metabolism 2
gma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00940 Phenylpropanoid biosynthesis 8
sot00941 Flavonoid biosynthesis 5
sot00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 5
sot00360 Phenylalanine metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 835391 103852056 103844790 106419382 106413901 107923725 107950088 107951185 102610777 100810240 100818969 102661206 100244486 100262465 7465317 7467090 25502192 25502189 11421651 101253066 101256794 102588204 102603520 107760680 107771750 107767942
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