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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   SDH6   succinate dehydrogenase subunit 
 ath-u.5   SDH6   succinate dehydrogenase subunit 
 ath-r.7   SDH6   succinate dehydrogenase subunit 
 ath-m.9   SDH6   succinate dehydrogenase subunit 
 ath-e.2   SDH6   succinate dehydrogenase subunit 
 ath-m.4.bio   SDH6   succinate dehydrogenase subunit 
 ath-m.4.hor   SDH6   succinate dehydrogenase subunit 
 ath-m.4.lig   SDH6   succinate dehydrogenase subunit 
 ath-m.4.tis   SDH6   succinate dehydrogenase subunit 
 bra-r.6   103836388   succinate dehydrogenase subunit 6, mitochondrial 
 bra-r.6   103871591   succinate dehydrogenase subunit 6, mitochondrial 
 bna-r.1   106346332   succinate dehydrogenase subunit 6, mitochondrial-like 
 bna-r.1   106362291   succinate dehydrogenase subunit 6, mitochondrial 
 bna-r.1   106383115   succinate dehydrogenase subunit 6, mitochondrial-like 
 ghi-r.1   107949052   succinate dehydrogenase subunit 6, mitochondrial 
 ghi-r.1   107915764   succinate dehydrogenase subunit 6, mitochondrial 
 cit-r.1   102623284   hypothetical protein 
 gma-u.5   100777981   uncharacterized LOC100777981 
 vvi-u.5   100241287   succinate dehydrogenase subunit 6, mitochondrial 
 ppo-u.5   7460089   succinate dehydrogenase subunit 6, mitochondrial 
 mtr-u.5   11443430   succinate dehydrogenase subunit 6, mitochondrial 
 sly-u.5   101262925   succinate dehydrogenase subunit 6, mitochondrial 
 sly-u.5   101258822   succinate dehydrogenase subunit 6, mitochondrial 
 sot-r.1   102582349   succinate dehydrogenase subunit 6, mitochondrial-like 
 sot-r.1   102604663   succinate dehydrogenase subunit 6, mitochondrial-like 
 nta-r.1   107815809   succinate dehydrogenase subunit 6, mitochondrial 
 nta-r.1   107811189   succinate dehydrogenase subunit 6, mitochondrial-like 
 nta-r.1   107785158   succinate dehydrogenase subunit 6, mitochondrial 
 osa-u.5   4344494   succinate dehydrogenase subunit 6, mitochondrial-like 
 zma-u.5   100280345   uncharacterized LOC100280345 
 zma-u.5   100501513   putative Rickettsia surface antigen family protein 
 tae-r.2   123159422   succinate dehydrogenase subunit 6, mitochondrial 
 tae-r.2   123147586   succinate dehydrogenase subunit 6, mitochondrial 
 tae-r.2   123165757   succinate dehydrogenase subunit 6, mitochondrial 
 hvu-r.1   123411149   succinate dehydrogenase subunit 6, mitochondrial 
 sbi-r.1   110437039   succinate dehydrogenase subunit 6, mitochondrial 
 bdi-r.1   100836049   succinate dehydrogenase subunit 6, mitochondrial 

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Top 50 coexpressed genes to SDH6 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SDH6 (ath-m.4.str coexpression data)

CoexMap"837369"


athSDH6 | Entrez gene ID : 837369      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 2 3 2 1 1 1 1 1 2 2 3 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0045273 [list] [network] respiratory chain complex II (succinate dehydrogenase)  (13 genes)  IDA  
GO:0000325 [list] [network] plant-type vacuole  (788 genes)  HDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO MF
GO:0043495 [list] [network] protein-membrane adaptor activity  (11 genes)  IDA  
Protein NP_563819.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 6,  nucl 3  (predict for NP_563819.1)
Subcellular
localization
TargetP
other 8  (predict for NP_563819.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
SDH6
ath-u.5
for
SDH6
ath-r.7
for
SDH6
ath-m.9
for
SDH6
ath-e.2
for
SDH6
ath-m.4.bio
for
SDH6
ath-m.4.hor
for
SDH6
ath-m.4.lig
for
SDH6
ath-m.4.tis
for
SDH6
bra-r.6
for
103836388
bra-r.6
for
103871591
bna-r.1
for
106346332
bna-r.1
for
106362291
bna-r.1
for
106383115
ghi-r.1
for
107949052
ghi-r.1
for
107915764
cit-r.1
for
102623284
gma-u.5
for
100777981
vvi-u.5
for
100241287
ppo-u.5
for
7460089
mtr-u.5
for
11443430
sly-u.5
for
101262925
sly-u.5
for
101258822
sot-r.1
for
102582349
sot-r.1
for
102604663
nta-r.1
for
107815809
nta-r.1
for
107811189
nta-r.1
for
107785158
osa-u.5
for
4344494
zma-u.5
for
100280345
zma-u.5
for
100501513
tae-r.2
for
123159422
tae-r.2
for
123147586
tae-r.2
for
123165757
hvu-r.1
for
123411149
sbi-r.1
for
110437039
bdi-r.1
for
100836049


Ortholog ID: 7400
Species ath bra bra bna bna bna ghi ghi cit gma vvi ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol SDH6 LOC103836388 LOC103871591 LOC106346332 LOC106383115 LOC106414913 LOC107949052 LOC107915764 LOC102623284 LOC100777981 LOC100241287 LOC7460089 LOC11443430 LOC101262925 LOC101258822 LOC102582349 LOC102604663 LOC107815809 LOC107811189 LOC107824906 LOC4344494 LOC100280345 LOC100501513 LOC123159422 LOC123147586 LOC123165757 LOC123411149 LOC110437039 LOC100836049
Function* succinate dehydrogenase subunit succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial-like succinate dehydrogenase subunit 6, mitochondrial-like succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial hypothetical protein uncharacterized LOC100777981 succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial-like succinate dehydrogenase subunit 6, mitochondrial-like succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial-like succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial-like uncharacterized LOC100280345 putative Rickettsia surface antigen family protein succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial succinate dehydrogenase subunit 6, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 4
bra00020 Citrate cycle (TCA cycle) 2
bra01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 10
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 10
ghi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 6
gma04016 MAPK signaling pathway - plant 3
gma00230 Purine metabolism 2
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 5
sot03060 Protein export 2
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
sot00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 10
nta03013 Nucleocytoplasmic transport 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta01240 Biosynthesis of cofactors 4
nta00190 Oxidative phosphorylation 4
nta00230 Purine metabolism 3
nta00730 Thiamine metabolism 3
nta01232 Nucleotide metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00190 Oxidative phosphorylation 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 10
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837369 103836388 103871591 106346332 106383115 106414913 107949052 107915764 102623284 100777981 100241287 7460089 11443430 101262925 101258822 102582349 102604663 107815809 107811189 107824906 4344494 100280345 100501513 123159422 123147586 123165757 123411149 110437039 100836049
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