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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT1G30200   F-box family protein 
 ath-u.5   AT1G30200   F-box family protein 
 ath-r.7   AT1G30200   F-box family protein 
 ath-m.9   AT1G30200   F-box family protein 
 ath-e.2   AT1G30200   F-box family protein 
 ath-m.4.bio   AT1G30200   F-box family protein 
 ath-m.4.hor   AT1G30200   F-box family protein 
 ath-m.4.lig   AT1G30200   F-box family protein 
 ath-m.4.tis   AT1G30200   F-box family protein 
 ath-u.5   AT4G18380   F-box family protein 
 ath-u.5   AT5G46170   F-box family protein 
 bra-r.6   103856300   F-box protein At4g18380 
 bra-r.6   103827750   F-box protein At5g46170 
 bra-r.6   103853690   F-box protein At5g46170 
 bna-r.1   125578140   F-box protein At1g30200-like 
 bna-r.1   106372074   F-box protein At1g30200 
 bna-r.1   106362441   F-box protein At1g30200 
 ghi-r.1   121222326   F-box protein At5g46170 
 ghi-r.1   121218673   F-box protein At5g46170 
 ghi-r.1   107960264   F-box protein At5g46170 
 cit-r.1   102617241   F-box protein At5g46170 
 gma-u.5   100802298   F-box protein At5g46170 
 gma-u.5   100794477   F-box protein At5g46170 
 vvi-u.5   100251447   F-box protein At5g46170 
 ppo-u.5   7490831   F-box protein At5g46170 
 ppo-u.5   7495309   F-box protein At5g46170 
 mtr-u.5   11439322   F-box protein At5g46170 
 mtr-u.5   120579877   F-box protein At5g46170-like 
 sly-u.5   101248164   F-box protein At5g46170 
 sly-u.5   101247348   F-box protein At5g46170 
 sot-r.1   102584855   F-box protein At5g46170-like 
 sot-r.1   102581893   F-box protein At5g46170 
 nta-r.1   107821320   F-box protein At4g18380-like 
 nta-r.1   107781028   F-box protein At5g46170 
 nta-r.1   107777007   F-box protein At4g18380 
 osa-u.5   4324608   F-box protein At4g18380 
 osa-u.5   4339280   F-box protein At5g46170 
 zma-u.5   100284879   uncharacterized LOC100284879 
 zma-u.5   103630579   F-box protein 
 zma-u.5   100280529   uncharacterized LOC100280529 
 tae-r.2   123070925   F-box protein At5g46170 
 tae-r.2   123079310   F-box protein At4g18380 
 tae-r.2   123139604   F-box protein At5g46170 
 hvu-r.1   123447488   F-box protein At5g46170-like 
 hvu-r.1   123444521   F-box protein At5g46170-like 
 sbi-r.1   8054901   F-box protein At4g18380 
 sbi-r.1   8079263   F-box protein At4g18380 
 sbi-r.1   8067488   F-box protein At5g46170 
 bdi-r.1   100842849   F-box protein At5g46170 
 bdi-r.1   100840624   F-box protein At4g18380 

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Top 50 coexpressed genes to AT1G30200 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G30200 (ath-m.4.str coexpression data)

CoexMap"839900"


athAT1G30200 | Entrez gene ID : 839900      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 3 3 1 2 1 2 2 2 2 3 2 3 3 2 3 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_564350.1 [sequence] [blastp]
NP_973940.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  cyto_nucl 3  (predict for NP_564350.1)
cyto 4,  chlo 3,  cyto_nucl 3  (predict for NP_973940.1)
Subcellular
localization
TargetP
other 8  (predict for NP_564350.1)
other 8  (predict for NP_973940.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT1G30200
ath-u.5
for
AT1G30200
ath-r.7
for
AT1G30200
ath-m.9
for
AT1G30200
ath-e.2
for
AT1G30200
ath-m.4.bio
for
AT1G30200
ath-m.4.hor
for
AT1G30200
ath-m.4.lig
for
AT1G30200
ath-m.4.tis
for
AT1G30200
ath-u.5
for
AT4G18380
ath-u.5
for
AT5G46170
bra-r.6
for
103856300
bra-r.6
for
103827750
bra-r.6
for
103853690
bna-r.1
for
125578140
bna-r.1
for
106372074
bna-r.1
for
106362441
ghi-r.1
for
121222326
ghi-r.1
for
121218673
ghi-r.1
for
107960264
cit-r.1
for
102617241
gma-u.5
for
100802298
gma-u.5
for
100794477
vvi-u.5
for
100251447
ppo-u.5
for
7490831
ppo-u.5
for
7495309
mtr-u.5
for
11439322
mtr-u.5
for
120579877
sly-u.5
for
101248164
sly-u.5
for
101247348
sot-r.1
for
102584855
sot-r.1
for
102581893
nta-r.1
for
107821320
nta-r.1
for
107781028
nta-r.1
for
107777007
osa-u.5
for
4324608
osa-u.5
for
4339280
zma-u.5
for
100284879
zma-u.5
for
103630579
zma-u.5
for
100280529
tae-r.2
for
123070925
tae-r.2
for
123079310
tae-r.2
for
123139604
hvu-r.1
for
123447488
hvu-r.1
for
123444521
sbi-r.1
for
8054901
sbi-r.1
for
8079263
sbi-r.1
for
8067488
bdi-r.1
for
100842849
bdi-r.1
for
100840624


Ortholog ID: 2571
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi sbi bdi bdi
Symbol AT1G30200 AT4G18380 AT5G46170 LOC103827750 LOC103853690 LOC103840426 LOC106362441 LOC111198767 LOC106407232 LOC121218673 LOC107959964 LOC107913799 LOC102617241 LOC100802298 LOC100794477 LOC100251447 LOC7490831 LOC7495309 LOC11439322 LOC120579877 LOC101248164 LOC101247348 LOC102584855 LOC102581893 LOC107821320 LOC107781028 LOC107813338 LOC4324608 LOC4339280 LOC100284879 LOC100280529 LOC100284740 LOC123079310 LOC123139604 LOC123062343 LOC123447488 LOC123444521 LOC8054901 LOC8079263 LOC8067488 LOC100842849 LOC100840624
Function* F-box family protein F-box family protein F-box family protein F-box protein At5g46170 F-box protein At5g46170 F-box protein At1g30200 F-box protein At1g30200 F-box protein At5g46170-like F-box protein At5g46170-like F-box protein At5g46170 F-box protein At5g46170 F-box protein At5g46170 F-box protein At5g46170 F-box protein At5g46170 F-box protein At5g46170 F-box protein At5g46170 F-box protein At5g46170 F-box protein At5g46170 F-box protein At5g46170 F-box protein At5g46170-like F-box protein At5g46170 F-box protein At5g46170 F-box protein At5g46170-like F-box protein At5g46170 F-box protein At4g18380-like F-box protein At5g46170 F-box protein At4g18380 F-box protein At4g18380 F-box protein At5g46170 uncharacterized LOC100284879 uncharacterized LOC100280529 F-box domain containing protein F-box protein At4g18380 F-box protein At5g46170 F-box protein At5g46170 F-box protein At5g46170-like F-box protein At5g46170-like F-box protein At4g18380 F-box protein At4g18380 F-box protein At5g46170 F-box protein At5g46170 F-box protein At4g18380
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
bra04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 3
cit00513 Various types of N-glycan biosynthesis 3
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 6
nta04082 Neuroactive ligand signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00260 Glycine, serine and threonine metabolism 2
nta00630 Glyoxylate and dicarboxylate metabolism 2
nta01200 Carbon metabolism 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 3
zma00510 N-Glycan biosynthesis 2
zma00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 3
tae00500 Starch and sucrose metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 839900 827567 834659 103827750 103853690 103840426 106362441 111198767 106407232 121218673 107959964 107913799 102617241 100802298 100794477 100251447 7490831 7495309 11439322 120579877 101248164 101247348 102584855 102581893 107821320 107781028 107813338 4324608 4339280 100284879 100280529 100284740 123079310 123139604 123062343 123447488 123444521 8054901 8079263 8067488 100842849 100840624
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