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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT1G32160   beta-casein (DUF760) 
 ath-u.5   AT1G32160   beta-casein (DUF760) 
 ath-r.7   AT1G32160   beta-casein (DUF760) 
 ath-m.9   AT1G32160   beta-casein (DUF760) 
 ath-e.2   AT1G32160   beta-casein (DUF760) 
 ath-m.4.bio   AT1G32160   beta-casein (DUF760) 
 ath-m.4.hor   AT1G32160   beta-casein (DUF760) 
 ath-m.4.lig   AT1G32160   beta-casein (DUF760) 
 ath-m.4.tis   AT1G32160   beta-casein (DUF760) 
 ath-u.5   AT3G17800   alanine-tRNA ligase, putative (DUF760) 
 ath-u.5   AT1G48450   alanine-tRNA ligase, putative (DUF760) 
 bra-r.6   103859727   UV-B-induced protein At3g17800, chloroplastic 
 bra-r.6   103868678   UV-B-induced protein At3g17800, chloroplastic 
 bra-r.6   103868901   UV-B-induced protein At3g17800, chloroplastic 
 bna-r.1   111198266   UV-B-induced protein At3g17800, chloroplastic-like 
 bna-r.1   111215635   UV-B-induced protein At3g17800, chloroplastic 
 bna-r.1   125608746   UV-B-induced protein At3g17800, chloroplastic-like 
 ghi-r.1   107938589   UV-B-induced protein At3g17800, chloroplastic 
 ghi-r.1   107931002   UV-B-induced protein At3g17800, chloroplastic 
 ghi-r.1   121223274   UV-B-induced protein At3g17800, chloroplastic 
 cit-r.1   102623998   UV-B-induced protein At3g17800, chloroplastic 
 cit-r.1   102611948   UV-B-induced protein At3g17800, chloroplastic-like 
 gma-u.5   100777314   UV-B-induced protein At3g17800, chloroplastic 
 gma-u.5   100793300   UV-B-induced protein At3g17800, chloroplastic 
 gma-u.5   100802337   UV-B-induced protein At3g17800, chloroplastic 
 vvi-u.5   100262899   UV-B-induced protein At3g17800, chloroplastic 
 vvi-u.5   100260823   UV-B-induced protein At3g17800, chloroplastic 
 vvi-u.5   100245443   UV-B-induced protein At3g17800, chloroplastic 
 ppo-u.5   7454005   UV-B-induced protein At3g17800, chloroplastic 
 ppo-u.5   18096988   UV-B-induced protein At3g17800, chloroplastic 
 mtr-u.5   11414357   UV-B-induced protein At3g17800, chloroplastic 
 mtr-u.5   112417478   UV-B-induced protein At3g17800, chloroplastic 
 mtr-u.5   25496632   UV-B-induced protein At3g17800, chloroplastic 
 sly-u.5   101248757   UV-B-induced protein At3g17800, chloroplastic 
 sot-r.1   102601007   UV-B-induced protein At3g17800, chloroplastic-like 
 sot-r.1   102595128   UV-B-induced protein At3g17800, chloroplastic 
 nta-r.1   107779810   UV-B-induced protein At3g17800, chloroplastic 
 nta-r.1   107819335   UV-B-induced protein At3g17800, chloroplastic-like 
 nta-r.1   107822791   UV-B-induced protein At3g17800, chloroplastic 
 osa-u.5   4336846   UV-B-induced protein At3g17800, chloroplastic 
 osa-u.5   4333917   UV-B-induced protein At3g17800, chloroplastic 
 zma-u.5   100278968   uncharacterized LOC100278968 
 zma-u.5   100276591   uncharacterized LOC100276591 
 zma-u.5   100383611   UV-B-induced protein chloroplastic 
 tae-r.2   123090882   UV-B-induced protein At3g17800, chloroplastic 
 tae-r.2   123087082   UV-B-induced protein At3g17800, chloroplastic 
 tae-r.2   123095908   UV-B-induced protein At3g17800, chloroplastic 
 hvu-r.1   123427776   UV-B-induced protein At3g17800, chloroplastic 
 hvu-r.1   123447529   UV-B-induced protein At3g17800, chloroplastic-like 
 sbi-r.1   8071101   UV-B-induced protein At3g17800, chloroplastic 
 sbi-r.1   110430552   UV-B-induced protein At3g17800, chloroplastic-like 
 bdi-r.1   104585415   UV-B-induced protein At3g17800, chloroplastic 
 bdi-r.1   100829350   UV-B-induced protein At3g17800, chloroplastic 
 cre-r.1   CHLRE_12g510000v5   uncharacterized protein 

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Top 50 coexpressed genes to AT1G32160 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G32160 (ath-m.4.str coexpression data)

CoexMap"840108"


athAT1G32160 | Entrez gene ID : 840108      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 11 3 3 3 2 3 3 2 3 1 2 3 2 3 3 2 2 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO:0009536 [list] [network] plastid  (5443 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_564389.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  chlo 2,  golg 2,  nucl_plas 2  (predict for NP_564389.1)
Subcellular
localization
TargetP
chlo 7,  mito 4  (predict for NP_564389.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT1G32160
ath-u.5
for
AT1G32160
ath-r.7
for
AT1G32160
ath-m.9
for
AT1G32160
ath-e.2
for
AT1G32160
ath-m.4.bio
for
AT1G32160
ath-m.4.hor
for
AT1G32160
ath-m.4.lig
for
AT1G32160
ath-m.4.tis
for
AT1G32160
ath-u.5
for
AT3G17800
ath-u.5
for
AT1G48450
bra-r.6
for
103859727
bra-r.6
for
103868678
bra-r.6
for
103868901
bna-r.1
for
111198266
bna-r.1
for
111215635
bna-r.1
for
125608746
ghi-r.1
for
107938589
ghi-r.1
for
107931002
ghi-r.1
for
121223274
cit-r.1
for
102623998
cit-r.1
for
102611948
gma-u.5
for
100777314
gma-u.5
for
100793300
gma-u.5
for
100802337
vvi-u.5
for
100262899
vvi-u.5
for
100260823
vvi-u.5
for
100245443
ppo-u.5
for
7454005
ppo-u.5
for
18096988
mtr-u.5
for
11414357
mtr-u.5
for
112417478
mtr-u.5
for
25496632
sly-u.5
for
101248757
sot-r.1
for
102601007
sot-r.1
for
102595128
nta-r.1
for
107779810
nta-r.1
for
107819335
nta-r.1
for
107822791
osa-u.5
for
4336846
osa-u.5
for
4333917
zma-u.5
for
100278968
zma-u.5
for
100276591
zma-u.5
for
100383611
tae-r.2
for
123090882
tae-r.2
for
123087082
tae-r.2
for
123095908
hvu-r.1
for
123427776
hvu-r.1
for
123447529
sbi-r.1
for
8071101
sbi-r.1
for
110430552
bdi-r.1
for
104585415
bdi-r.1
for
100829350
cre-r.1
for
CHLRE_12g510000v5


Ortholog ID: 1974
Species ath ath ath bra bra bra bna bna bna ghi ghi ghi cit cit gma gma gma vvi vvi vvi ppo ppo mtr mtr mtr sly sot sot nta nta nta osa osa zma zma zma tae tae tae hvu hvu sbi sbi bdi bdi cre
Symbol AT1G32160 AT3G17800 AT1G48450 LOC103859727 LOC103868678 LOC103869650 LOC111215635 LOC125608746 BNAC09G31230D LOC107938589 LOC121223274 LOC107908433 LOC102623998 LOC102611948 LOC100777314 LOC100802337 LOC100802697 LOC100262899 LOC100260823 LOC100245443 LOC7454005 LOC18105600 LOC11414357 LOC112417478 LOC25496632 LOC101248757 LOC102601007 LOC102595128 LOC107819335 LOC107822791 LOC107825298 LOC4336846 LOC4333917 LOC100278968 LOC100276591 LOC100383611 LOC123095908 LOC123190337 LOC123054475 LOC123427776 LOC123447529 LOC8071101 LOC110430552 LOC104585415 LOC100829350 CHLRE_12g510000v5
Function* beta-casein (DUF760) alanine-tRNA ligase, putative (DUF760) alanine-tRNA ligase, putative (DUF760) UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic-like UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic-like UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic-like UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic-like UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic uncharacterized LOC100278968 uncharacterized LOC100276591 UV-B-induced protein chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic-like UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic-like UV-B-induced protein At3g17800, chloroplastic UV-B-induced protein At3g17800, chloroplastic uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01240 Biosynthesis of cofactors 2
ath00240 Pyrimidine metabolism 2
ath00410 beta-Alanine metabolism 2
ath00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03060 Protein export 2
ath01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra01230 Biosynthesis of amino acids 2
bra04626 Plant-pathogen interaction 2
bra00561 Glycerolipid metabolism 2
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00290 Valine, leucine and isoleucine biosynthesis 2
bna00650 Butanoate metabolism 2
bna00660 C5-Branched dibasic acid metabolism 2
bna00770 Pantothenate and CoA biosynthesis 2
bna01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01230 Biosynthesis of amino acids 3
bna00260 Glycine, serine and threonine metabolism 2
bna00261 Monobactam biosynthesis 2
bna00270 Cysteine and methionine metabolism 2
bna00300 Lysine biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00740 Riboflavin metabolism 2
bna01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00740 Riboflavin metabolism 2
ghi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 6
ghi00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00900 Terpenoid backbone biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 2
gma04141 Protein processing in endoplasmic reticulum 2
gma04144 Endocytosis 2
gma00860 Porphyrin metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 4
gma00564 Glycerophospholipid metabolism 2
gma00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00010 Glycolysis / Gluconeogenesis 5
vvi01200 Carbon metabolism 3
vvi01230 Biosynthesis of amino acids 3
vvi00620 Pyruvate metabolism 2
vvi00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00620 Pyruvate metabolism 4
ppo01200 Carbon metabolism 4
ppo01240 Biosynthesis of cofactors 4
ppo00630 Glyoxylate and dicarboxylate metabolism 3
ppo03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04146 Peroxisome 3
ppo00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
ppo00350 Tyrosine metabolism 2
ppo00360 Phenylalanine metabolism 2
ppo00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta00350 Tyrosine metabolism 2
nta00360 Phenylalanine metabolism 2
nta00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00410 beta-Alanine metabolism 2
nta00770 Pantothenate and CoA biosynthesis 2
nta00906 Carotenoid biosynthesis 2
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00561 Glycerolipid metabolism 5
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
tae00730 Thiamine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00230 Purine metabolism 2
tae00730 Thiamine metabolism 2
tae01232 Nucleotide metabolism 2
tae01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00860 Porphyrin metabolism 2
hvu00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00740 Riboflavin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00900 Terpenoid backbone biosynthesis 2
bdi00561 Glycerolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 840108 821048 841266 103859727 103868678 103869650 111215635 125608746 106390550 107938589 121223274 107908433 102623998 102611948 100777314 100802337 100802697 100262899 100260823 100245443 7454005 18105600 11414357 112417478 25496632 101248757 102601007 102595128 107819335 107822791 107825298 4336846 4333917 100278968 100276591 100383611 123095908 123190337 123054475 123427776 123447529 8071101 110430552 104585415 100829350 5716554
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