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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str  USPL1  unknown seed protein like 1 
 ath-u.5  USPL1  unknown seed protein like 1 
 ath-r.7  USPL1  unknown seed protein like 1 
 ath-m.9  USPL1  unknown seed protein like 1 
 ath-e.2  USPL1  unknown seed protein like 1 
 ath-m.4.bio  USPL1  unknown seed protein like 1 
 ath-m.4.hor  USPL1  unknown seed protein like 1 
 ath-m.4.lig  USPL1  unknown seed protein like 1 
 ath-m.4.tis  USPL1  unknown seed protein like 1 
 bra-r.6  103832950  BURP domain-containing protein BNM2A 
 bra-r.6  103828192  BURP domain-containing protein BNM2A 
 bra-r.6  103871414  BURP domain-containing protein BNM2A 
 bna-r.1  106351127  BURP domain-containing protein BNM2A-like 
 bna-r.1  106404657  BURP domain-containing protein BNM2A-like 
 bna-r.1  106439079  dehydration-responsive protein RD22-like 
 ghi-r.1  107891102  BURP domain-containing protein BNM2A 
 ghi-r.1  107938849  BURP domain-containing protein BNM2A 
 cit-r.1  102611517  BURP domain protein USPL1-like 
 cit-r.1  102613109  BURP domain-containing protein BNM2A-like 
 gma-u.5  SCB1  seed coat BURP domain protein 1 
 gma-u.5  100789387  BURP domain-containing protein BNM2A 
 gma-u.5  100800777  BURP domain-containing protein BNM2A 
 vvi-u.5  100852969  BURP domain-containing protein BNM2A 
 ppo-u.5  7464036  BURP domain-containing protein BNM2A 
 ppo-u.5  7464041  BURP domain protein USPL1 
 ppo-u.5  7461209  BURP domain protein USPL1 
 mtr-u.5  11414316  BURP domain-containing protein BNM2A 
 mtr-u.5  112421167  BURP domain-containing protein 2 
 mtr-u.5  11417240  uncharacterized LOC11417240 
 sly-u.5  101267565  BURP domain protein USPL1 
 sly-u.5  101255440  BURP domain protein USPL1 
 sot-r.1  102601020  BURP domain-containing protein 5-like 
 sot-r.1  102594880  GATA zinc finger domain-containing protein 14-like 
 sot-r.1  102586370  BURP domain-containing protein 17-like 
 nta-r.1  107772076  BURP domain protein USPL1 
 nta-r.1  107766981  BURP domain protein USPL1-like 
 nta-r.1  107765166  BURP domain protein USPL1 
 tae-r.2  123099401  protein RAFTIN 1B-like 
 tae-r.2  123099399  protein RAFTIN 1B-like 

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Top 50 coexpressed genes to USPL1 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to USPL1 (ath-m.4.str coexpression data)

CoexMap"841355"


athUSPL1 | Entrez gene ID : 841355
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta tae cre hvu bdi osa zma sbi
Paralog 9 3 3 2 2 3 1 3 3 2 3 3 2 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048316 [list] [network] seed development  (775 genes)  IMP  
GO CC
GO:0000326 [list] [network] protein storage vacuole  (13 genes)  IDA  
GO:0005576 [list] [network] extracellular region  (3158 genes)  ISM  
GO MF
Protein NP_175357.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 4,  extr 2,  chlo 1,  cyto 1,  mito 1,  plas 1,  E.R. 1,  chlo_mito 1,  E.R._plas 1,  mito_plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for NP_175357.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_175357.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
USPL1


ath-u.5
for
USPL1


ath-r.7
for
USPL1


ath-m.9
for
USPL1


ath-e.2
for
USPL1


ath-m.4.bio
for
USPL1


ath-m.4.hor
for
USPL1


ath-m.4.lig
for
USPL1


ath-m.4.tis
for
USPL1


bra-r.6
for
103832950


bra-r.6
for
103828192


bra-r.6
for
103871414


bna-r.1
for
106351127


bna-r.1
for
106404657


bna-r.1
for
106439079


ghi-r.1
for
107891102


ghi-r.1
for
107938849


cit-r.1
for
102611517


cit-r.1
for
102613109


gma-u.5
for
SCB1


gma-u.5
for
100789387


gma-u.5
for
100800777


vvi-u.5
for
100852969


ppo-u.5
for
7464036


ppo-u.5
for
7464041


ppo-u.5
for
7461209


mtr-u.5
for
11414316


mtr-u.5
for
112421167


mtr-u.5
for
11417240


sly-u.5
for
101267565


sly-u.5
for
101255440


sot-r.1
for
102601020


sot-r.1
for
102594880


sot-r.1
for
102586370


nta-r.1
for
107772076


nta-r.1
for
107766981


nta-r.1
for
107765166


tae-r.2
for
123099401


tae-r.2
for
123099399



Ortholog ID: 2593
Species ath bra bra bra bna bna bna ghi ghi cit cit cit gma gma gma vvi ppo ppo ppo mtr mtr mtr sly sly sot sot sot nta nta nta tae tae
Symbol USPL1 LOC103832950 LOC103828192 LOC103871414 LOC106351127 LOC106404657 LOC106419576 LOC107891102 LOC107938849 LOC102611517 LOC102613109 LOC102614289 LOC100789387 LOC100800777 LOC100527485 LOC100852969 LOC7464036 LOC7464041 LOC7461209 LOC11420433 LOC25492741 LOC25492744 LOC101267565 LOC101255440 LOC102601020 LOC102586370 LOC102599684 LOC107772076 LOC107765166 LOC107805585 LOC123099401 LOC123099399
Function* unknown seed protein like 1 BURP domain-containing protein BNM2A BURP domain-containing protein BNM2A BURP domain-containing protein BNM2A BURP domain-containing protein BNM2A-like BURP domain-containing protein BNM2A-like dehydration-responsive protein RD22-like BURP domain-containing protein BNM2A BURP domain-containing protein BNM2A BURP domain protein USPL1-like BURP domain-containing protein BNM2A-like BURP domain-containing protein BNM2C BURP domain-containing protein BNM2A BURP domain-containing protein BNM2A BURP domain-containing protein BURP domain-containing protein BNM2A BURP domain-containing protein BNM2A BURP domain protein USPL1 BURP domain protein USPL1 BURP domain-containing protein BNM2A BURP domain-containing protein 12 BURP domain-containing protein 9 BURP domain protein USPL1 BURP domain protein USPL1 BURP domain-containing protein 5-like BURP domain-containing protein 17-like BURP domain-containing protein 5 BURP domain protein USPL1 BURP domain protein USPL1 BURP domain protein USPL1-like protein RAFTIN 1B-like protein RAFTIN 1B-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00480 Glutathione metabolism 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04145 Phagosome 2
vvi04517 IgSF CAM signaling 2
vvi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00520 Amino sugar and nucleotide sugar metabolism 3
ppo04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00999 Biosynthesis of various plant secondary metabolites 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
nta00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
tae00999 Biosynthesis of various plant secondary metabolites 3
tae00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 4
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 841355 103832950 103828192 103871414 106351127 106404657 106419576 107891102 107938849 102611517 102613109 102614289 100789387 100800777 100527485 100852969 7464036 7464041 7461209 11420433 25492741 25492744 101267565 101255440 102601020 102586370 102599684 107772076 107765166 107805585 123099401 123099399
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