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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT1G70500   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G70500   Pectin lyase-like superfamily protein 
 ath-r.7   AT1G70500   Pectin lyase-like superfamily protein 
 ath-m.9   AT1G70500   Pectin lyase-like superfamily protein 
 ath-e.2   AT1G70500   Pectin lyase-like superfamily protein 
 ath-m.4.bio   AT1G70500   Pectin lyase-like superfamily protein 
 ath-m.4.hor   AT1G70500   Pectin lyase-like superfamily protein 
 ath-m.4.lig   AT1G70500   Pectin lyase-like superfamily protein 
 ath-m.4.tis   AT1G70500   Pectin lyase-like superfamily protein 
 ath-u.5   AT1G23460   Pectin lyase-like superfamily protein 
 bra-r.6   103829271   probable polygalacturonase At1g80170 
 bra-r.6   103840755   probable polygalacturonase At1g80170 
 bna-r.1   125589962   probable polygalacturonase At1g80170 
 bna-r.1   111199834   probable polygalacturonase At1g80170 
 ghi-r.1   107922404   probable polygalacturonase At1g80170 
 ghi-r.1   107918238   probable polygalacturonase At1g80170 
 ghi-r.1   107886567   probable polygalacturonase At1g80170 
 cit-r.1   102623269   probable polygalacturonase At1g80170 
 gma-u.5   100806068   probable polygalacturonase At1g80170 
 gma-u.5   100804067   probable polygalacturonase At1g80170 
 vvi-u.5   100263605   probable polygalacturonase At1g80170 
 ppo-u.5   7480405   probable polygalacturonase At1g80170 
 ppo-u.5   18101886   probable polygalacturonase At1g80170 
 mtr-u.5   25501371   probable polygalacturonase At1g80170 
 sly-u.5   101248050   probable polygalacturonase At1g80170 
 sly-u.5   101257654   probable polygalacturonase At1g80170 
 sot-r.1   102578221   probable polygalacturonase At1g80170 
 sot-r.1   102579939   probable polygalacturonase At1g80170 
 nta-r.1   107819519   putative polygalacturonase At1g80170 
 nta-r.1   107789394   putative polygalacturonase At1g80170 
 nta-r.1   107813010   putative polygalacturonase At1g80170 
 osa-u.5   4328189   probable polygalacturonase At1g80170 
 tae-r.2   123131980   probable polygalacturonase At1g80170 
 tae-r.2   123136060   probable polygalacturonase At1g80170 
 tae-r.2   123143510   probable polygalacturonase At1g80170 
 hvu-r.1   123404704   probable polygalacturonase At1g80170 
 bdi-r.1   100832774   probable polygalacturonase At1g80170 

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Top 50 coexpressed genes to AT1G70500 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G70500 (ath-m.4.str coexpression data)

CoexMap"843386"


athAT1G70500 | Entrez gene ID : 843386      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa tae hvu bdi zma sbi cre
Paralog 10 2 2 3 1 2 1 2 1 2 2 3 1 3 1 1 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0005975 [list] [network] carbohydrate metabolic process  (601 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0004650 [list] [network] polygalacturonase activity  (69 genes)  IEA  
Protein NP_177207.1 [sequence] [blastp]
Subcellular
localization
wolf
vacu 3,  E.R. 3,  E.R._vacu 3,  extr 1  (predict for NP_177207.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_177207.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT1G70500
ath-u.5
for
AT1G70500
ath-r.7
for
AT1G70500
ath-m.9
for
AT1G70500
ath-e.2
for
AT1G70500
ath-m.4.bio
for
AT1G70500
ath-m.4.hor
for
AT1G70500
ath-m.4.lig
for
AT1G70500
ath-m.4.tis
for
AT1G70500
ath-u.5
for
AT1G23460
bra-r.6
for
103829271
bra-r.6
for
103840755
bna-r.1
for
125589962
bna-r.1
for
111199834
ghi-r.1
for
107922404
ghi-r.1
for
107918238
ghi-r.1
for
107886567
cit-r.1
for
102623269
gma-u.5
for
100806068
gma-u.5
for
100804067
vvi-u.5
for
100263605
ppo-u.5
for
7480405
ppo-u.5
for
18101886
mtr-u.5
for
25501371
sly-u.5
for
101248050
sly-u.5
for
101257654
sot-r.1
for
102578221
sot-r.1
for
102579939
nta-r.1
for
107819519
nta-r.1
for
107789394
nta-r.1
for
107813010
osa-u.5
for
4328189
tae-r.2
for
123131980
tae-r.2
for
123136060
tae-r.2
for
123143510
hvu-r.1
for
123404704
bdi-r.1
for
100832774


Ortholog ID: 4822
Species ath ath bra bra bna bna ghi ghi ghi cit gma gma vvi ppo ppo ppo mtr sly sly sot sot nta nta nta osa tae tae tae hvu bdi
Symbol AT1G70500 AT1G23460 LOC103829271 LOC103835664 LOC111199834 LOC111199832 LOC107922404 LOC107918238 LOC107909681 LOC102623269 LOC100806068 LOC100804067 LOC100263605 LOC7480405 LOC18101886 LOC7489119 LOC25501371 LOC101248050 LOC101257654 LOC102578221 LOC102579939 LOC107789394 LOC107813010 LOC142168648 LOC4328189 LOC123131980 LOC123136060 LOC123143510 LOC123404704 LOC100832774
Function* Pectin lyase-like superfamily protein Pectin lyase-like superfamily protein probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 putative polygalacturonase At1g80170 putative polygalacturonase At1g80170 putative polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170 probable polygalacturonase At1g80170
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00564 Glycerophospholipid metabolism 2
ghi00565 Ether lipid metabolism 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 3
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00051 Fructose and mannose metabolism 3
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 3
nta00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00941 Flavonoid biosynthesis 2
hvu04712 Circadian rhythm - plant 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 843386 838954 103829271 103835664 111199834 111199832 107922404 107918238 107909681 102623269 100806068 100804067 100263605 7480405 18101886 7489119 25501371 101248050 101257654 102578221 102579939 107789394 107813010 142168648 4328189 123131980 123136060 123143510 123404704 100832774
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