ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.str	AT1G71420	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.9	AT1G71420	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.bio	AT1G71420	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.hor	AT1G71420	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.lig	AT1G71420	Tetratricopeptide repeat (TPR)-like superfamily protein
ath-m.4.tis	AT1G71420	Tetratricopeptide repeat (TPR)-like superfamily protein
bra-r.6	103831662	pentatricopeptide repeat-containing protein At1g71420
bna-r.1	106406438	pentatricopeptide repeat-containing protein At1g71420-like
ghi-r.1	107959307	pentatricopeptide repeat-containing protein At1g71420
ghi-r.1	121203576	pentatricopeptide repeat-containing protein At1g71420
cit-r.1	102611202	pentatricopeptide repeat-containing protein At1g71420
vvi-u.5	100263666	pentatricopeptide repeat-containing protein At1g71420
mtr-u.5	11436182	pentatricopeptide repeat-containing protein At1g71420
sly-u.5	101250082	pentatricopeptide repeat-containing protein At1g71420
nta-r.1	107764402	pentatricopeptide repeat-containing protein At1g71420-like
nta-r.1	107765800	pentatricopeptide repeat-containing protein At1g71420-like

Annotation

functional annotation

KEGG

GO BP

GO:0009451 [list] [network] RNA modification

(230 genes)

IEA

GO CC

GO:0005739 [list] [network] mitochondrion

(4244 genes)

ISM

GO MF

GO:0008270 [list] [network] zinc ion binding	(391 genes)	IEA
GO:0003723 [list] [network] RNA binding	(1764 genes)	IEA

Protein

NP_177298.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 5, mito 2, nucl 1, cyto 1, cysk 1, nucl_plas 1

(predict for NP_177298.1)

Subcellular
localization
TargetP

chlo 6

(predict for NP_177298.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.str for AT1G71420	ath-m.9 for AT1G71420	ath-m.4.bio for AT1G71420	ath-m.4.hor for AT1G71420	ath-m.4.lig for AT1G71420	ath-m.4.tis for AT1G71420	bra-r.6 for 103831662	bna-r.1 for 106406438	ghi-r.1 for 107959307	ghi-r.1 for 121203576	cit-r.1 for 102611202	vvi-u.5 for 100263666	mtr-u.5 for 11436182	sly-u.5 for 101250082	nta-r.1 for 107764402	nta-r.1 for 107765800

Ortholog

Ortholog ID: 13486

Species	bra	bna	ghi	ghi	cit	vvi	mtr	sly	nta	nta
Symbol	LOC103831662	LOC106406438	LOC107959307	LOC121203576	LOC102611202	LOC100263666	LOC11436182	LOC101250082	LOC107764402	LOC107765800
Function^*	pentatricopeptide repeat-containing protein At1g71420	pentatricopeptide repeat-containing protein At1g71420-like	pentatricopeptide repeat-containing protein At1g71420	pentatricopeptide repeat-containing protein At1g71420	pentatricopeptide repeat-containing protein At1g71420	pentatricopeptide repeat-containing protein At1g71420	pentatricopeptide repeat-containing protein At1g71420	pentatricopeptide repeat-containing protein At1g71420	pentatricopeptide repeat-containing protein At1g71420-like	pentatricopeptide repeat-containing protein At1g71420-like
Coexmap	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.
Coexpression	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.	Please wait a moment.
KEGG Info
Expression	Expression pattern	Expression pattern	Expression pattern	Expression pattern	Expression pattern	Expression pattern	Expression pattern	Expression pattern	Expression pattern	Expression pattern
Entrez Gene ID^*	103831662	106406438	107959307	121203576	102611202	100263666	11436182	101250082	107764402	107765800