Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   AT1G79220   Mitochondrial transcription termination factor family protein 
 ath-u.5   AT1G79220   Mitochondrial transcription termination factor family protein 
 ath-r.7   AT1G79220   Mitochondrial transcription termination factor family protein 
 ath-m.9   AT1G79220   Mitochondrial transcription termination factor family protein 
 ath-e.2   AT1G79220   Mitochondrial transcription termination factor family protein 
 ath-m.4.bio   AT1G79220   Mitochondrial transcription termination factor family protein 
 ath-m.4.hor   AT1G79220   Mitochondrial transcription termination factor family protein 
 ath-m.4.lig   AT1G79220   Mitochondrial transcription termination factor family protein 
 ath-m.4.tis   AT1G79220   Mitochondrial transcription termination factor family protein 
 bra-r.6   103832399   uncharacterized LOC103832399 
 bna-r.1   106354771   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 bna-r.1   111213468   transcription termination factor MTERF6, chloroplastic/mitochondrial-like 
 ghi-r.1   107929881   transcription termination factor MTERF9, chloroplastic 
 ghi-r.1   107953862   transcription termination factor MTERF9, chloroplastic 
 cit-r.1   102624598   uncharacterized LOC102624598 
 gma-u.5   100799629   mTERF domain-containing protein 
 vvi-u.5   100254688   uncharacterized LOC100254688 
 ppo-u.5   7462555   uncharacterized LOC7462555 
 mtr-u.5   11419889   transcription termination factor MTERF2, chloroplastic 
 sly-u.5   101251063   transcription termination factor MTERF6, chloroplastic/mitochondrial 
 sot-r.1   102596471   uncharacterized LOC102596471 
 nta-r.1   142177168   transcription termination factor MTERF15, mitochondrial-like 

close


Top 50 coexpressed genes to AT1G79220 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT1G79220 (ath-m.4.str coexpression data)

CoexMap"844263"


athAT1G79220 | Entrez gene ID : 844263      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta bdi osa tae zma cre sbi hvu
Paralog 9 1 2 2 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009735 [list] [network] response to cytokinin  (124 genes)  IEP  
GO:0009739 [list] [network] response to gibberellin  (125 genes)  IEP  
GO:0009733 [list] [network] response to auxin  (344 genes)  IEP  
GO:0009737 [list] [network] response to abscisic acid  (550 genes)  IEP  
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0003690 [list] [network] double-stranded DNA binding  (800 genes)  IEA  
Protein NP_565202.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  chlo_mito 5,  mito 3,  cyto_mito 2  (predict for NP_565202.1)
Subcellular
localization
TargetP
mito 7,  scret 4  (predict for NP_565202.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
AT1G79220
ath-u.5
for
AT1G79220
ath-r.7
for
AT1G79220
ath-m.9
for
AT1G79220
ath-e.2
for
AT1G79220
ath-m.4.bio
for
AT1G79220
ath-m.4.hor
for
AT1G79220
ath-m.4.lig
for
AT1G79220
ath-m.4.tis
for
AT1G79220
bra-r.6
for
103832399
bna-r.1
for
106354771
bna-r.1
for
111213468
ghi-r.1
for
107929881
ghi-r.1
for
107953862
cit-r.1
for
102624598
gma-u.5
for
100799629
vvi-u.5
for
100254688
ppo-u.5
for
7462555
mtr-u.5
for
11419889
sly-u.5
for
101251063
sot-r.1
for
102596471
nta-r.1
for
142177168


Ortholog ID: 13488
Species ath bra bna bna ghi ghi cit gma vvi ppo mtr sly sot nta
Symbol AT1G79220 LOC103832399 LOC106354771 LOC111213468 LOC107929881 LOC107953862 LOC102624598 LOC100799629 LOC100254688 LOC7462555 LOC11419889 LOC101251063 LOC102596471 LOC142177168
Function* Mitochondrial transcription termination factor family protein uncharacterized LOC103832399 transcription termination factor MTERF6, chloroplastic/mitochondrial transcription termination factor MTERF6, chloroplastic/mitochondrial-like transcription termination factor MTERF9, chloroplastic transcription termination factor MTERF9, chloroplastic uncharacterized LOC102624598 mTERF domain-containing protein uncharacterized LOC100254688 uncharacterized LOC7462555 transcription termination factor MTERF2, chloroplastic transcription termination factor MTERF6, chloroplastic/mitochondrial uncharacterized LOC102596471 transcription termination factor MTERF15, mitochondrial-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 844263 103832399 106354771 111213468 107929881 107953862 102624598 100799629 100254688 7462555 11419889 101251063 102596471 142177168
The preparation time of this page was 0.1 [sec].