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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.str   RPS17   ribosomal protein S17 
 ath-m.9   RPS17   ribosomal protein S17 
 ath-m.4.bio   RPS17   ribosomal protein S17 
 ath-m.4.hor   RPS17   ribosomal protein S17 
 ath-m.4.lig   RPS17   ribosomal protein S17 
 ath-m.4.tis   RPS17   ribosomal protein S17 
 bra-r.6   103839491   30S ribosomal protein S17, chloroplastic 
 bra-r.6   103839492   30S ribosomal protein S17, chloroplastic 
 bna-r.1   106418337   30S ribosomal protein S17, chloroplastic 
 bna-r.1   106432060   30S ribosomal protein S17, chloroplastic-like 
 bna-r.1   106432065   30S ribosomal protein S17, chloroplastic 
 ghi-r.1   107941084   30S ribosomal protein S17, chloroplastic 
 ghi-r.1   107914837   30S ribosomal protein S17, chloroplastic 
 ghi-r.1   107906527   30S ribosomal protein S17, chloroplastic 
 cit-r.1   102616824   30S ribosomal protein S17, chloroplastic 
 gma-u.5   100782488   30S ribosomal protein S17, chloroplastic 
 gma-u.5   100789205   30S ribosomal protein S17, chloroplastic 
 vvi-u.5   100251530   small ribosomal subunit protein uS17c 
 ppo-u.5   112328367   30S ribosomal protein S17, chloroplastic 
 mtr-u.5   11432384   30S ribosomal protein S17, chloroplastic 
 sly-u.5   101264910   small ribosomal subunit protein uS17c 
 sot-r.1   102591306   30S ribosomal protein S17, chloroplastic 
 nta-r.1   107819989   small ribosomal subunit protein uS17c-like 
 nta-r.1   107815349   small ribosomal subunit protein uS17c 
 osa-u.5   4337506   30S ribosomal protein S17, chloroplastic-like 
 zma-u.5   103642224   30S ribosomal protein S17, chloroplastic-like 
 zma-u.5   542469   30S ribosomal protein S17, chloroplastic-like 
 tae-r.2   123191228   30S ribosomal protein S17, chloroplastic 
 tae-r.2   123055407   30S ribosomal protein S17, chloroplastic 
 tae-r.2   123042981   30S ribosomal protein S17, chloroplastic 
 hvu-r.1   123411663   30S ribosomal protein S17, chloroplastic 
 sbi-r.1   110436277   30S ribosomal protein S17, chloroplastic 
 bdi-r.1   100845152   30S ribosomal protein S17, chloroplastic 

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Top 50 coexpressed genes to RPS17 (ath-m.4.str coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to RPS17 (ath-m.4.str coexpression data)

CoexMap"844324"


athRPS17 | Entrez gene ID : 844324      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 6 2 3 3 1 2 1 1 1 1 1 2 1 2 3 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath03010 [list] [network] Ribosome (394 genes)
GO BP
GO:0032544 [list] [network] plastid translation  (20 genes)  IMP  
GO:0006412 [list] [network] translation  (926 genes)  TAS  
GO CC
GO:0000312 [list] [network] plastid small ribosomal subunit  (2 genes)  ISS  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA  
GO:0009941 [list] [network] chloroplast envelope  (585 genes)  HDA  
GO:0009570 [list] [network] chloroplast stroma  (693 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA IDA ISM  
GO MF
GO:0003729 [list] [network] mRNA binding  (1514 genes)  IDA  
Protein NP_178103.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 2  (predict for NP_178103.1)
Subcellular
localization
TargetP
chlo 9  (predict for NP_178103.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.str
for
RPS17
ath-m.9
for
RPS17
ath-m.4.bio
for
RPS17
ath-m.4.hor
for
RPS17
ath-m.4.lig
for
RPS17
ath-m.4.tis
for
RPS17
bra-r.6
for
103839491
bra-r.6
for
103839492
bna-r.1
for
106418337
bna-r.1
for
106432060
bna-r.1
for
106432065
ghi-r.1
for
107941084
ghi-r.1
for
107914837
ghi-r.1
for
107906527
cit-r.1
for
102616824
gma-u.5
for
100782488
gma-u.5
for
100789205
vvi-u.5
for
100251530
ppo-u.5
for
112328367
mtr-u.5
for
11432384
sly-u.5
for
101264910
sot-r.1
for
102591306
nta-r.1
for
107819989
nta-r.1
for
107815349
osa-u.5
for
4337506
zma-u.5
for
103642224
zma-u.5
for
542469
tae-r.2
for
123191228
tae-r.2
for
123055407
tae-r.2
for
123042981
hvu-r.1
for
123411663
sbi-r.1
for
110436277
bdi-r.1
for
100845152


Ortholog ID: 8320
Species bra bra bna bna bna ghi ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi
Symbol LOC103839491 LOC103839492 LOC106418337 LOC106432060 LOC106432065 LOC107941084 LOC107914837 LOC107906527 LOC102616824 LOC100782488 LOC100789205 LOC100251530 LOC112328367 LOC11432384 LOC101264910 LOC102591306 LOC107819989 LOC107815349 LOC4337506 LOC103642224 LOC542469 LOC123191228 LOC123055407 LOC123042981 LOC123411663 LOC110436277 LOC100845152
Function* 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic-like 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic small ribosomal subunit protein uS17c 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic small ribosomal subunit protein uS17c 30S ribosomal protein S17, chloroplastic small ribosomal subunit protein uS17c-like small ribosomal subunit protein uS17c 30S ribosomal protein S17, chloroplastic-like 30S ribosomal protein S17, chloroplastic-like 30S ribosomal protein S17, chloroplastic-like 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic 30S ribosomal protein S17, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 3
ghi00380 Tryptophan metabolism 2
ghi00040 Pentose and glucuronate interconversions 2
ghi00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 9
ghi00380 Tryptophan metabolism 2
ghi00190 Oxidative phosphorylation 2
ghi00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 14
gma00190 Oxidative phosphorylation 2
gma00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 13
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
sbi00860 Porphyrin metabolism 2
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 11
bdi00970 Aminoacyl-tRNA biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103839491 103839492 106418337 106432060 106432065 107941084 107914837 107906527 102616824 100782488 100789205 100251530 112328367 11432384 101264910 102591306 107819989 107815349 4337506 103642224 542469 123191228 123055407 123042981 123411663 110436277 100845152
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