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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT2G10440   mediator of RNA polymerase II transcription subunit 
 ath-m.9   AT2G10440   mediator of RNA polymerase II transcription subunit 
 ath-m.4.bio   AT2G10440   mediator of RNA polymerase II transcription subunit 
 ath-m.4.hor   AT2G10440   mediator of RNA polymerase II transcription subunit 
 ath-m.4.lig   AT2G10440   mediator of RNA polymerase II transcription subunit 
 ath-m.4.str   AT2G10440   mediator of RNA polymerase II transcription subunit 
 bra-r.6   103875064   probable mediator of RNA polymerase II transcription subunit 15c 
 bna-r.1   106349109   probable mediator of RNA polymerase II transcription subunit 15c 

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Top 50 coexpressed genes to AT2G10440 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G10440 (ath-m.4.tis coexpression data)

CoexMap"815503"


athAT2G10440 | Entrez gene ID : 815503      
Species ath bra bna cre vvi ppo mtr hvu tae osa gma zma sly ghi cit sbi nta bdi sot
Paralog 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0031490 [list] [network] chromatin DNA binding  (22 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001154512.1 [sequence] [blastp]
NP_178842.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  vacu 1  (predict for NP_001154512.1)
nucl 8,  chlo 1,  cyto 1,  vacu 1  (predict for NP_178842.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001154512.1)
other 9  (predict for NP_178842.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT2G10440
ath-m.9
for
AT2G10440
ath-m.4.bio
for
AT2G10440
ath-m.4.hor
for
AT2G10440
ath-m.4.lig
for
AT2G10440
ath-m.4.str
for
AT2G10440
bra-r.6
for
103875064
bna-r.1
for
106349109


Ortholog ID: 15807
Species bra bna bna
Symbol LOC103875064 LOC106349109 LOC106411167
Function* probable mediator of RNA polymerase II transcription subunit 15c probable mediator of RNA polymerase II transcription subunit 15c probable mediator of RNA polymerase II transcription subunit 15c
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 5
bna00020 Citrate cycle (TCA cycle) 2
bna00480 Glutathione metabolism 2
bna01200 Carbon metabolism 2
bna01210 2-Oxocarboxylic acid metabolism 2
Expression Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 103875064 106349109 106411167
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