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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT2G46540   fiber 
 ath-u.5   AT2G46540   fiber 
 ath-r.7   AT2G46540   fiber 
 ath-m.9   AT2G46540   fiber 
 ath-e.2   AT2G46540   fiber 
 ath-m.4.bio   AT2G46540   fiber 
 ath-m.4.hor   AT2G46540   fiber 
 ath-m.4.lig   AT2G46540   fiber 
 ath-m.4.str   AT2G46540   fiber 
 bra-r.6   103866457   uncharacterized LOC103866457 
 bra-r.6   103866282   uncharacterized LOC103866282 
 bna-r.1   106414370   uncharacterized LOC106414370 
 bna-r.1   106450500   uncharacterized LOC106450500 
 bna-r.1   BNAA04G27200D   uncharacterized BNAA04G27200D 
 ghi-r.1   107924664   uncharacterized LOC107924664 
 ghi-r.1   107948166   uncharacterized LOC107948166 
 ghi-r.1   107924739   uncharacterized LOC107924739 
 cit-r.1   102628104   hypothetical protein 
 cit-r.1   127901470   uncharacterized LOC127901470 
 gma-u.5   100795854   uncharacterized LOC100795854 
 gma-u.5   100785256   uncharacterized LOC100785256 
 ppo-u.5   7457406   uncharacterized LOC7457406 
 mtr-u.5   25499772   uncharacterized LOC25499772 
 sly-u.5   101255923   uncharacterized LOC101255923 
 sot-r.1   102587205   fiber protein Fb11 
 nta-r.1   107775240   uncharacterized LOC107775240 
 osa-u.5   4324256   uncharacterized LOC4324256 
 osa-u.5   4339476   uncharacterized LOC4339476 
 zma-u.5   118471917   uncharacterized LOC118471917 
 zma-u.5   100282278   uncharacterized LOC100282278 
 sbi-r.1   8061084   uncharacterized LOC8061084 
 bdi-r.1   100823876   uncharacterized LOC100823876 
 cre-r.1   CHLRE_12g537050v5   uncharacterized protein 

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Top 50 coexpressed genes to AT2G46540 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT2G46540 (ath-m.4.tis coexpression data)

CoexMap"819266"


athAT2G46540 | Entrez gene ID : 819266      
Species ath bra bna ghi cit gma ppo mtr sly sot nta osa zma sbi bdi cre tae vvi hvu
Paralog 9 2 3 3 2 2 1 1 1 1 1 2 2 1 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0005739 [list] [network] mitochondrion  (4244 genes)  HDA  
GO MF
Protein NP_566079.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 2,  cyto 2,  cyto_nucl 2,  pero 1,  E.R._plas 1,  plas 1,  E.R. 1,  cysk_nucl 1  (predict for NP_566079.1)
Subcellular
localization
TargetP
scret 9  (predict for NP_566079.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT2G46540
ath-u.5
for
AT2G46540
ath-r.7
for
AT2G46540
ath-m.9
for
AT2G46540
ath-e.2
for
AT2G46540
ath-m.4.bio
for
AT2G46540
ath-m.4.hor
for
AT2G46540
ath-m.4.lig
for
AT2G46540
ath-m.4.str
for
AT2G46540
bra-r.6
for
103866457
bra-r.6
for
103866282
bna-r.1
for
106414370
bna-r.1
for
106450500
bna-r.1
for
BNAA04G27200D
ghi-r.1
for
107924664
ghi-r.1
for
107948166
ghi-r.1
for
107924739
cit-r.1
for
102628104
cit-r.1
for
127901470
gma-u.5
for
100795854
gma-u.5
for
100785256
ppo-u.5
for
7457406
mtr-u.5
for
25499772
sly-u.5
for
101255923
sot-r.1
for
102587205
nta-r.1
for
107775240
osa-u.5
for
4324256
osa-u.5
for
4339476
zma-u.5
for
118471917
zma-u.5
for
100282278
sbi-r.1
for
8061084
bdi-r.1
for
100823876
cre-r.1
for
CHLRE_12g537050v5


Ortholog ID: 8919
Species ath bra bra bna bna bna ghi ghi ghi cit cit gma gma ppo mtr sly sot nta osa osa zma zma sbi bdi cre
Symbol AT2G46540 LOC103866457 LOC103866282 LOC106414370 LOC106450500 BNAA04G27200D LOC107924664 LOC107948166 LOC107924739 LOC102628104 LOC127901470 LOC100795854 LOC100785256 LOC7457406 LOC25499772 LOC101255923 LOC102587205 LOC107775240 LOC4324256 LOC4339476 LOC118471917 LOC100282278 LOC8061084 LOC100823876 CHLRE_12g537050v5
Function* fiber uncharacterized LOC103866457 uncharacterized LOC103866282 uncharacterized LOC106414370 uncharacterized LOC106450500 uncharacterized BNAA04G27200D uncharacterized LOC107924664 uncharacterized LOC107948166 uncharacterized LOC107924739 hypothetical protein uncharacterized LOC127901470 uncharacterized LOC100795854 uncharacterized LOC100785256 uncharacterized LOC7457406 uncharacterized LOC25499772 uncharacterized LOC101255923 fiber protein Fb11 uncharacterized LOC107775240 uncharacterized LOC4324256 uncharacterized LOC4339476 uncharacterized LOC118471917 uncharacterized LOC100282278 uncharacterized LOC8061084 uncharacterized LOC100823876 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 2
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00190 Oxidative phosphorylation 6
bna03010 Ribosome 4
bna03018 RNA degradation 2
bna03040 Spliceosome 2
bna03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 3
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 3
ghi00100 Steroid biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00190 Oxidative phosphorylation 4
ghi04145 Phagosome 2
ghi03018 RNA degradation 2
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 7
cit00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
gma04145 Phagosome 3
gma04120 Ubiquitin mediated proteolysis 2
gma04148 Efferocytosis 2
gma04517 IgSF CAM signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00190 Oxidative phosphorylation 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 7
ppo04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00190 Oxidative phosphorylation 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00190 Oxidative phosphorylation 5
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00190 Oxidative phosphorylation 4
sot03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00540 Lipopolysaccharide biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00190 Oxidative phosphorylation 4
zma00230 Purine metabolism 2
zma00730 Thiamine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00190 Oxidative phosphorylation 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00190 Oxidative phosphorylation 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 819266 103866457 103866282 106414370 106450500 106453231 107924664 107948166 107924739 102628104 127901470 100795854 100785256 7457406 25499772 101255923 102587205 107775240 4324256 4339476 118471917 100282278 8061084 100823876 5718474
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