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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT3G13440   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-u.5   AT3G13440   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-r.7   AT3G13440   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.9   AT3G13440   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-e.2   AT3G13440   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.bio   AT3G13440   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.hor   AT3G13440   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.lig   AT3G13440   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 ath-m.4.str   AT3G13440   S-adenosyl-L-methionine-dependent methyltransferases superfamily protein 
 bra-r.6   103849775   methyltransferase N6AMT1-like 
 bra-r.6   103849788   methyltransferase N6AMT1-like 
 bra-r.6   103870135   methyltransferase N6AMT1 
 bna-r.1   106345392   methyltransferase N6AMT1-like 
 bna-r.1   106444542   methyltransferase N6AMT1-like 
 bna-r.1   106375061   methyltransferase N6AMT1 
 ghi-r.1   107896676   methyltransferase N6AMT1 
 ghi-r.1   107916089   methyltransferase N6AMT1 
 cit-r.1   102617336   uncharacterized LOC102617336 
 gma-u.5   100815115   hemK methyltransferase family member 2-like 
 gma-u.5   100790739   pentatricopeptide repeat-containing protein At2g22410, mitochondrial 
 ppo-u.5   7477777   uncharacterized LOC7477777 
 mtr-u.5   112421251   methyltransferase N6AMT1 
 sly-u.5   101249900   uncharacterized LOC101249900 
 sot-r.1   102605507   hemK methyltransferase family member 2 
 nta-r.1   107796501   uncharacterized LOC107796501 
 osa-u.5   4334624   uncharacterized LOC4334624 
 zma-u.5   100273353   hemK methyltransferase family member 2 
 zma-u.5   103652279   methyltransferase N6AMT1 
 zma-u.5   100283871   uncharacterized LOC100283871 
 tae-r.2   123114054   methyltransferase N6AMT1 
 tae-r.2   123105721   methyltransferase N6AMT1 
 tae-r.2   123123543   methyltransferase N6AMT1 
 hvu-r.1   123453104   methyltransferase N6AMT1 
 sbi-r.1   8057351   hemK methyltransferase family member 2 
 bdi-r.1   100829370   hemK methyltransferase family member 2 
 cre-r.1   CHLRE_01g036750v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G13440 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G13440 (ath-m.4.tis coexpression data)

CoexMap"820545"


athAT3G13440 | Entrez gene ID : 820545      
Species ath bra bna ghi cit gma ppo mtr sly sot nta osa zma tae hvu sbi bdi cre vvi
Paralog 9 3 3 2 1 2 1 1 1 1 1 1 3 3 1 1 1 1 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006415 [list] [network] translational termination  (11 genes)  IMP  
GO:0060586 [list] [network] multicellular organismal-level iron ion homeostasis  (29 genes)  IMP  
GO CC
GO:0005829 [list] [network] cytosol  (2593 genes)  IDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0008757 [list] [network] S-adenosylmethionine-dependent methyltransferase activity  (128 genes)  ISS  
Protein NP_001327233.1 [sequence] [blastp]
NP_001327234.1 [sequence] [blastp]
NP_187952.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 1,  extr 1,  cysk 1,  chlo_mito 1  (predict for NP_001327233.1)
chlo 4,  chlo_mito 4,  nucl 2,  mito 1,  vacu 1  (predict for NP_001327234.1)
cyto 7,  chlo 1,  extr 1,  cysk 1,  chlo_mito 1  (predict for NP_187952.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001327233.1)
other 5  (predict for NP_001327234.1)
other 8  (predict for NP_187952.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT3G13440
ath-u.5
for
AT3G13440
ath-r.7
for
AT3G13440
ath-m.9
for
AT3G13440
ath-e.2
for
AT3G13440
ath-m.4.bio
for
AT3G13440
ath-m.4.hor
for
AT3G13440
ath-m.4.lig
for
AT3G13440
ath-m.4.str
for
AT3G13440
bra-r.6
for
103849775
bra-r.6
for
103849788
bra-r.6
for
103870135
bna-r.1
for
106345392
bna-r.1
for
106444542
bna-r.1
for
106375061
ghi-r.1
for
107896676
ghi-r.1
for
107916089
cit-r.1
for
102617336
gma-u.5
for
100815115
gma-u.5
for
100790739
ppo-u.5
for
7477777
mtr-u.5
for
112421251
sly-u.5
for
101249900
sot-r.1
for
102605507
nta-r.1
for
107796501
osa-u.5
for
4334624
zma-u.5
for
100273353
zma-u.5
for
103652279
zma-u.5
for
100283871
tae-r.2
for
123114054
tae-r.2
for
123105721
tae-r.2
for
123123543
hvu-r.1
for
123453104
sbi-r.1
for
8057351
bdi-r.1
for
100829370
cre-r.1
for
CHLRE_01g036750v5


Ortholog ID: 7998
Species ath bra bra bra bna bna bna ghi ghi cit gma gma ppo mtr sly sot nta osa zma zma zma tae tae tae hvu sbi bdi cre
Symbol AT3G13440 LOC103849775 LOC103849788 LOC103870135 LOC106345392 LOC106444542 LOC106375061 LOC107896676 LOC107916089 LOC102617336 LOC100815115 LOC100790739 LOC7477777 LOC112421251 LOC101249900 LOC102605507 LOC107796501 LOC4334624 LOC100273353 LOC103652279 LOC100283871 LOC123114054 LOC123105721 LOC123123543 LOC123453104 LOC8057351 LOC100829370 CHLRE_01g036750v5
Function* S-adenosyl-L-methionine-dependent methyltransferases superfamily protein methyltransferase N6AMT1-like methyltransferase N6AMT1-like methyltransferase N6AMT1 methyltransferase N6AMT1-like methyltransferase N6AMT1-like methyltransferase N6AMT1 methyltransferase N6AMT1 methyltransferase N6AMT1 uncharacterized LOC102617336 hemK methyltransferase family member 2-like pentatricopeptide repeat-containing protein At2g22410, mitochondrial uncharacterized LOC7477777 methyltransferase N6AMT1 uncharacterized LOC101249900 hemK methyltransferase family member 2 uncharacterized LOC107796501 uncharacterized LOC4334624 hemK methyltransferase family member 2 methyltransferase N6AMT1 uncharacterized LOC100283871 methyltransferase N6AMT1 methyltransferase N6AMT1 methyltransferase N6AMT1 methyltransferase N6AMT1 hemK methyltransferase family member 2 hemK methyltransferase family member 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 3
cit04130 SNARE interactions in vesicular transport 2
cit04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
ppo03015 mRNA surveillance pathway 3
ppo04136 Autophagy - other 3
ppo04382 Cornified envelope formation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04517 IgSF CAM signaling 2
sot00330 Arginine and proline metabolism 2
sot00410 beta-Alanine metabolism 2
sot00770 Pantothenate and CoA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae04141 Protein processing in endoplasmic reticulum 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
tae04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00190 Oxidative phosphorylation 3
bdi04145 Phagosome 3
bdi04142 Lysosome 2
bdi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820545 103849775 103849788 103870135 106345392 106444542 106375061 107896676 107916089 102617336 100815115 100790739 7477777 112421251 101249900 102605507 107796501 4334624 100273353 103652279 100283871 123114054 123105721 123123543 123453104 8057351 100829370 5715483
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