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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT3G27110   Peptidase family M48 family protein 
 ath-u.5   AT3G27110   Peptidase family M48 family protein 
 ath-r.7   AT3G27110   Peptidase family M48 family protein 
 ath-m.9   AT3G27110   Peptidase family M48 family protein 
 ath-e.2   AT3G27110   Peptidase family M48 family protein 
 ath-m.4.bio   AT3G27110   Peptidase family M48 family protein 
 ath-m.4.hor   AT3G27110   Peptidase family M48 family protein 
 ath-m.4.lig   AT3G27110   Peptidase family M48 family protein 
 ath-m.4.str   AT3G27110   Peptidase family M48 family protein 
 bra-r.6   103875247   protease HtpX 
 bna-r.1   106349283   protease HtpX-like 
 bna-r.1   106376964   protease HtpX homolog 
 ghi-r.1   107911756   uncharacterized LOC107911756 
 ghi-r.1   107937119   protease HtpX homolog 
 ghi-r.1   107924163   protease HtpX homolog 
 cit-r.1   102607506   plastoglobule-localized metallopeptidase 48, chloroplastic 
 gma-u.5   100776801   protease HtpX homolog 
 vvi-u.5   100263426   plastoglobule-localized metallopeptidase 48, chloroplastic 
 ppo-u.5   7456230   plastoglobule-localized metallopeptidase 48, chloroplastic 
 mtr-u.5   25497914   uncharacterized LOC25497914 
 sly-u.5   101249793   plastoglobule-localized metallopeptidase 48, chloroplastic 
 sot-r.1   102585296   uncharacterized LOC102585296 
 nta-r.1   107789950   plastoglobule-localized metallopeptidase 48, chloroplastic 
 nta-r.1   107764622   plastoglobule-localized metallopeptidase 48, chloroplastic 
 osa-u.5   4323840   plastoglobule-localized metallopeptidase 48, chloroplastic 
 zma-u.5   100191294   putative peptidase M48 family protein 
 tae-r.2   123077223   uncharacterized LOC123077223 
 tae-r.2   123068718   protease HtpX homolog 
 tae-r.2   123060223   uncharacterized LOC123060223 
 hvu-r.1   123442757   uncharacterized LOC123442757 
 sbi-r.1   8085061   uncharacterized LOC8085061 
 bdi-r.1   100839697   uncharacterized LOC100839697 
 cre-r.1   CHLRE_14g620150v5   uncharacterized protein 

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Top 50 coexpressed genes to AT3G27110 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT3G27110 (ath-m.4.tis coexpression data)

CoexMap"822330"


athAT3G27110 | Entrez gene ID : 822330      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 1 1 1 1 1 1 2 1 1 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:1900055 [list] [network] regulation of leaf senescence  (62 genes)  IDA IMP  
GO:0010150 [list] [network] leaf senescence  (128 genes)  IEP  
GO CC
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0004222 [list] [network] metalloendopeptidase activity  (35 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001325722.1 [sequence] [blastp]
NP_001325723.1 [sequence] [blastp]
NP_001325724.1 [sequence] [blastp]
NP_566808.1 [sequence] [blastp]
NP_850640.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for NP_001325722.1)
chlo 10  (predict for NP_001325723.1)
chlo 10  (predict for NP_001325724.1)
chlo 10  (predict for NP_566808.1)
chlo 10  (predict for NP_850640.1)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001325722.1)
chlo 7  (predict for NP_001325723.1)
chlo 7  (predict for NP_001325724.1)
chlo 7  (predict for NP_566808.1)
chlo 7  (predict for NP_850640.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT3G27110
ath-u.5
for
AT3G27110
ath-r.7
for
AT3G27110
ath-m.9
for
AT3G27110
ath-e.2
for
AT3G27110
ath-m.4.bio
for
AT3G27110
ath-m.4.hor
for
AT3G27110
ath-m.4.lig
for
AT3G27110
ath-m.4.str
for
AT3G27110
bra-r.6
for
103875247
bna-r.1
for
106349283
bna-r.1
for
106376964
ghi-r.1
for
107911756
ghi-r.1
for
107937119
ghi-r.1
for
107924163
cit-r.1
for
102607506
gma-u.5
for
100776801
vvi-u.5
for
100263426
ppo-u.5
for
7456230
mtr-u.5
for
25497914
sly-u.5
for
101249793
sot-r.1
for
102585296
nta-r.1
for
107789950
nta-r.1
for
107764622
osa-u.5
for
4323840
zma-u.5
for
100191294
tae-r.2
for
123077223
tae-r.2
for
123068718
tae-r.2
for
123060223
hvu-r.1
for
123442757
sbi-r.1
for
8085061
bdi-r.1
for
100839697
cre-r.1
for
CHLRE_14g620150v5


Ortholog ID: 9514
Species ath bra bna bna ghi ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT3G27110 LOC103875247 LOC106349283 LOC106376964 LOC107911756 LOC107937119 LOC107904818 LOC102607506 LOC100776801 LOC100263426 LOC7456230 LOC25497914 LOC101249793 LOC102585296 LOC107789950 LOC107764622 LOC4323840 LOC100191294 LOC123077223 LOC123068718 LOC123060223 LOC123442757 LOC8085061 LOC100839697 CHLRE_14g620150v5
Function* Peptidase family M48 family protein protease HtpX protease HtpX-like protease HtpX homolog uncharacterized LOC107911756 protease HtpX homolog protease HtpX plastoglobule-localized metallopeptidase 48, chloroplastic protease HtpX homolog plastoglobule-localized metallopeptidase 48, chloroplastic plastoglobule-localized metallopeptidase 48, chloroplastic uncharacterized LOC25497914 plastoglobule-localized metallopeptidase 48, chloroplastic uncharacterized LOC102585296 plastoglobule-localized metallopeptidase 48, chloroplastic plastoglobule-localized metallopeptidase 48, chloroplastic plastoglobule-localized metallopeptidase 48, chloroplastic putative peptidase M48 family protein uncharacterized LOC123077223 protease HtpX homolog uncharacterized LOC123060223 uncharacterized LOC123442757 uncharacterized LOC8085061 uncharacterized LOC100839697 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 5
bna00630 Glyoxylate and dicarboxylate metabolism 5
bna01200 Carbon metabolism 5
bna04016 MAPK signaling pathway - plant 5
bna04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 5
bna00630 Glyoxylate and dicarboxylate metabolism 5
bna01200 Carbon metabolism 5
bna04016 MAPK signaling pathway - plant 5
bna04146 Peroxisome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04081 Hormone signaling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00380 Tryptophan metabolism 2
ppo00630 Glyoxylate and dicarboxylate metabolism 2
ppo01200 Carbon metabolism 2
ppo04016 MAPK signaling pathway - plant 2
ppo04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00860 Porphyrin metabolism 3
sly03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00380 Tryptophan metabolism 2
tae00630 Glyoxylate and dicarboxylate metabolism 2
tae01200 Carbon metabolism 2
tae04016 MAPK signaling pathway - plant 2
tae04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04136 Autophagy - other 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822330 103875247 106349283 106376964 107911756 107937119 107904818 102607506 100776801 100263426 7456230 25497914 101249793 102585296 107789950 107764622 4323840 100191294 123077223 123068718 123060223 123442757 8085061 100839697 5715883
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