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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   DEG1   DegP protease 1 
 ath-u.5   DEG1   DegP protease 1 
 ath-r.7   DEG1   DegP protease 1 
 ath-m.9   DEG1   DegP protease 1 
 ath-e.2   DEG1   DegP protease 1 
 ath-m.4.bio   DEG1   DegP protease 1 
 ath-m.4.hor   DEG1   DegP protease 1 
 ath-m.4.lig   DEG1   DegP protease 1 
 ath-m.4.str   DEG1   DegP protease 1 
 bra-r.6   103875178   protease Do-like 1, chloroplastic 
 bna-r.1   106349222   protease Do-like 1, chloroplastic 
 bna-r.1   111207922   protease Do-like 1, chloroplastic 
 ghi-r.1   107911779   protease Do-like 1, chloroplastic 
 ghi-r.1   107922802   protease Do-like 1, chloroplastic 
 cit-r.1   102617734   protease Do-like 1, chloroplastic 
 gma-u.5   100783877   protease Do-like 1, chloroplastic 
 gma-u.5   100783304   protease Do-like 1, chloroplastic-like 
 vvi-u.5   100241896   protease Do-like 1, chloroplastic 
 ppo-u.5   7496827   protease Do-like 1, chloroplastic 
 mtr-u.5   11439438   protease Do-like 1, chloroplastic 
 sly-u.5   101250650   protease Do-like 1, chloroplastic 
 sot-r.1   102591161   protease Do-like 1, chloroplastic 
 nta-r.1   107822689   protease Do-like 1, chloroplastic 
 nta-r.1   107768772   protease Do-like 1, chloroplastic 
 osa-u.5   4339651   protease Do-like 1, chloroplastic 
 zma-u.5   100279259   uncharacterized LOC100279259 
 zma-u.5   103632808   protease Do-like 8, chloroplastic 
 zma-u.5   100191797   uncharacterized LOC100191797 
 tae-r.2   123146936   protease Do-like 1, chloroplastic 
 tae-r.2   123183187   protease Do-like 1, chloroplastic 
 hvu-r.1   123450930   protease Do-like 1, chloroplastic 
 sbi-r.1   8064691   protease Do-like 1, chloroplastic 
 bdi-r.1   100824173   protease Do-like 1, chloroplastic 
 cre-r.1   CHLRE_02g088400v5   uncharacterized protein 
 cre-r.1   CHLRE_12g498500v5   uncharacterized protein 

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Top 50 coexpressed genes to DEG1 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to DEG1 (ath-m.4.tis coexpression data)

CoexMap"822416"


athDEG1 | Entrez gene ID : 822416      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 2 1 2 1 1 1 1 1 2 1 3 2 1 1 1 2
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0010206 [list] [network] photosystem II repair  (13 genes)  IMP  
GO:0030163 [list] [network] protein catabolic process  (264 genes)  TAS  
GO CC
GO:0009543 [list] [network] chloroplast thylakoid lumen  (52 genes)  HDA  
GO:0031977 [list] [network] thylakoid lumen  (69 genes)  HDA  
GO:0009535 [list] [network] chloroplast thylakoid membrane  (314 genes)  IDA  
GO:0009534 [list] [network] chloroplast thylakoid  (417 genes)  HDA IDA  
GO:0009579 [list] [network] thylakoid  (507 genes)  HDA  
GO:0005829 [list] [network] cytosol  (2593 genes)  HDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  HDA  
GO:0005634 [list] [network] nucleus  (10367 genes)  HDA ISM  
GO MF
GO:0004252 [list] [network] serine-type endopeptidase activity  (50 genes)  IDA  
GO:0008236 [list] [network] serine-type peptidase activity  (60 genes)  IDA  
GO:0042802 [list] [network] identical protein binding  (414 genes)  IPI  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_001325789.1 [sequence] [blastp]
NP_189431.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 9  (predict for NP_001325789.1)
chlo 9  (predict for NP_189431.2)
Subcellular
localization
TargetP
chlo 7  (predict for NP_001325789.1)
chlo 7  (predict for NP_189431.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
DEG1
ath-u.5
for
DEG1
ath-r.7
for
DEG1
ath-m.9
for
DEG1
ath-e.2
for
DEG1
ath-m.4.bio
for
DEG1
ath-m.4.hor
for
DEG1
ath-m.4.lig
for
DEG1
ath-m.4.str
for
DEG1
bra-r.6
for
103875178
bna-r.1
for
106349222
bna-r.1
for
111207922
ghi-r.1
for
107911779
ghi-r.1
for
107922802
cit-r.1
for
102617734
gma-u.5
for
100783877
gma-u.5
for
100783304
vvi-u.5
for
100241896
ppo-u.5
for
7496827
mtr-u.5
for
11439438
sly-u.5
for
101250650
sot-r.1
for
102591161
nta-r.1
for
107822689
nta-r.1
for
107768772
osa-u.5
for
4339651
zma-u.5
for
100279259
zma-u.5
for
103632808
zma-u.5
for
100191797
tae-r.2
for
123146936
tae-r.2
for
123183187
hvu-r.1
for
123450930
sbi-r.1
for
8064691
bdi-r.1
for
100824173
cre-r.1
for
CHLRE_02g088400v5
cre-r.1
for
CHLRE_12g498500v5


Ortholog ID: 8967
Species ath bra bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta osa zma zma zma tae tae hvu sbi bdi cre cre
Symbol DEG1 LOC103875178 LOC106349222 LOC111207922 LOC107911779 LOC107922802 LOC102617734 LOC100783877 LOC100783304 LOC100241896 LOC7496827 LOC11439438 LOC101250650 LOC102591161 LOC107822689 LOC107768772 LOC4339651 LOC100279259 LOC103632808 LOC100191797 LOC123146936 LOC123183187 LOC123450930 LOC8064691 LOC100824173 CHLRE_02g088400v5 CHLRE_12g498500v5
Function* DegP protease 1 protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic-like protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic uncharacterized LOC100279259 protease Do-like 8, chloroplastic uncharacterized LOC100191797 protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic protease Do-like 1, chloroplastic uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01212 Fatty acid metabolism 3
bna00062 Fatty acid elongation 2
bna01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna01212 Fatty acid metabolism 3
bna00062 Fatty acid elongation 2
bna01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 6
ghi03010 Ribosome 2
ghi00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 6
ghi00790 Folate biosynthesis 2
ghi00906 Carotenoid biosynthesis 2
ghi03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 2
cit00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00260 Glycine, serine and threonine metabolism 2
vvi00630 Glyoxylate and dicarboxylate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00260 Glycine, serine and threonine metabolism 2
mtr00630 Glyoxylate and dicarboxylate metabolism 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00195 Photosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00450 Selenocompound metabolism 3
tae01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
hvu00900 Terpenoid backbone biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01230 Biosynthesis of amino acids 3
cre00290 Valine, leucine and isoleucine biosynthesis 2
cre00966 Glucosinolate biosynthesis 2
cre01210 2-Oxocarboxylic acid metabolism 2
cre03060 Protein export 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 822416 103875178 106349222 111207922 107911779 107922802 102617734 100783877 100783304 100241896 7496827 11439438 101250650 102591161 107822689 107768772 4339651 100279259 103632808 100191797 123146936 123183187 123450930 8064691 100824173 5727437 66055462
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