Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT3G56550   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.9   AT3G56550   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.bio   AT3G56550   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.hor   AT3G56550   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.lig   AT3G56550   Pentatricopeptide repeat (PPR) superfamily protein 
 ath-m.4.str   AT3G56550   Pentatricopeptide repeat (PPR) superfamily protein 
 bra-r.6   103841556   pentatricopeptide repeat-containing protein At3g56550 
 cit-r.1   102618056   pentatricopeptide repeat-containing protein At3g56550 

close


Top 50 coexpressed genes to AT3G56550 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT3G56550 (ath-m.4.tis coexpression data)

CoexMap"824822"


athAT3G56550 | Entrez gene ID : 824822      
Species ath bra cit tae zma sly cre vvi hvu ghi sbi osa ppo mtr gma bdi bna sot nta
Paralog 6 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005739 [list] [network] mitochondrion  (4244 genes)  ISM  
GO MF
GO:0008270 [list] [network] zinc ion binding  (391 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (1764 genes)  IEA  
Protein NP_001319768.1 [sequence] [blastp]
NP_191214.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  mito 1  (predict for NP_001319768.1)
chlo 8,  mito 1  (predict for NP_191214.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for NP_001319768.1)
other 6,  mito 3  (predict for NP_191214.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT3G56550
ath-m.9
for
AT3G56550
ath-m.4.bio
for
AT3G56550
ath-m.4.hor
for
AT3G56550
ath-m.4.lig
for
AT3G56550
ath-m.4.str
for
AT3G56550
bra-r.6
for
103841556
cit-r.1
for
102618056


Ortholog ID: 18131
Species bra cit
Symbol LOC103841556 LOC102618056
Function* pentatricopeptide repeat-containing protein At3g56550 pentatricopeptide repeat-containing protein At3g56550
Coexmap

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
Expression Expression pattern Expression pattern
Entrez Gene ID* 103841556 102618056
The preparation time of this page was 0.1 [sec].