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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT4G07390   Mannose-P-dolichol utilization defect 1 protein 
 ath-u.5   AT4G07390   Mannose-P-dolichol utilization defect 1 protein 
 ath-r.7   AT4G07390   Mannose-P-dolichol utilization defect 1 protein 
 ath-m.9   AT4G07390   Mannose-P-dolichol utilization defect 1 protein 
 ath-e.2   AT4G07390   Mannose-P-dolichol utilization defect 1 protein 
 ath-m.4.bio   AT4G07390   Mannose-P-dolichol utilization defect 1 protein 
 ath-m.4.hor   AT4G07390   Mannose-P-dolichol utilization defect 1 protein 
 ath-m.4.lig   AT4G07390   Mannose-P-dolichol utilization defect 1 protein 
 ath-m.4.str   AT4G07390   Mannose-P-dolichol utilization defect 1 protein 
 ath-u.5   AT5G59470   Mannose-P-dolichol utilization defect 1 protein 
 bra-r.6   103858459   mannose-P-dolichol utilization defect 1 protein homolog 2 
 bra-r.6   103851577   mannose-P-dolichol utilization defect 1 protein homolog 1 
 bna-r.1   106361832   mannose-P-dolichol utilization defect 1 protein homolog 1-like 
 bna-r.1   106388430   mannose-P-dolichol utilization defect 1 protein homolog 2 
 bna-r.1   106388462   mannose-P-dolichol utilization defect 1 protein homolog 2 
 ghi-r.1   107958152   mannose-P-dolichol utilization defect 1 protein homolog 2 
 ghi-r.1   107905602   mannose-P-dolichol utilization defect 1 protein homolog 2 
 cit-r.1   102622747   mannose-P-dolichol utilization defect 1 protein homolog 2 
 gma-u.5   100806764   mannose-P-dolichol utilization defect 1 protein homolog 
 gma-u.5   100787632   mannose-P-dolichol utilization defect 1 protein homolog 
 vvi-u.5   100264234   mannose-P-dolichol utilization defect 1 protein homolog 2 
 ppo-u.5   18104845   mannose-P-dolichol utilization defect 1 protein homolog 2 
 mtr-u.5   11420388   mannose-P-dolichol utilization defect 1 protein homolog 2 
 sly-u.5   101260321   mannose-P-dolichol utilization defect 1 protein homolog 2 
 sot-r.1   102583488   mannose-P-dolichol utilization defect 1 protein homolog 2 
 nta-r.1   107795649   mannose-P-dolichol utilization defect 1 protein homolog 2 
 nta-r.1   107781603   mannose-P-dolichol utilization defect 1 protein homolog 2 
 nta-r.1   107779663   mannose-P-dolichol utilization defect 1 protein homolog 2-like 
 osa-u.5   4343225   mannose-P-dolichol utilization defect 1 protein homolog 2 
 zma-u.5   118476414   mannose-P-dolichol utilization defect 1 protein homolog 2 
 tae-r.2   123128857   mannose-P-dolichol utilization defect 1 protein homolog 2 
 tae-r.2   123146002   mannose-P-dolichol utilization defect 1 protein homolog 2 
 tae-r.2   123139355   mannose-P-dolichol utilization defect 1 protein homolog 2 
 hvu-r.1   123402400   mannose-P-dolichol utilization defect 1 protein homolog 2 
 sbi-r.1   8074231   mannose-P-dolichol utilization defect 1 protein homolog 2 
 bdi-r.1   100829270   mannose-P-dolichol utilization defect 1 protein homolog 2 
 cre-r.1   CHLRE_17g722500v5   uncharacterized protein 

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Top 50 coexpressed genes to AT4G07390 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G07390 (ath-m.4.tis coexpression data)

CoexMap"826170"


athAT4G07390 | Entrez gene ID : 826170      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 10 2 3 2 1 2 1 1 1 1 1 3 1 1 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009409 [list] [network] response to cold  (436 genes)  IEP  
GO CC
GO MF
Protein NP_001328799.1 [sequence] [blastp]
NP_567315.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  vacu 3,  cyto 1,  chlo 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1  (predict for NP_001328799.1)
plas 4,  vacu 3,  cyto 1,  chlo 1,  extr 1,  E.R. 1,  cyto_nucl 1,  cyto_pero 1  (predict for NP_567315.1)
Subcellular
localization
TargetP
other 8  (predict for NP_001328799.1)
other 8  (predict for NP_567315.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT4G07390
ath-u.5
for
AT4G07390
ath-r.7
for
AT4G07390
ath-m.9
for
AT4G07390
ath-e.2
for
AT4G07390
ath-m.4.bio
for
AT4G07390
ath-m.4.hor
for
AT4G07390
ath-m.4.lig
for
AT4G07390
ath-m.4.str
for
AT4G07390
ath-u.5
for
AT5G59470
bra-r.6
for
103858459
bra-r.6
for
103851577
bna-r.1
for
106361832
bna-r.1
for
106388430
bna-r.1
for
106388462
ghi-r.1
for
107958152
ghi-r.1
for
107905602
cit-r.1
for
102622747
gma-u.5
for
100806764
gma-u.5
for
100787632
vvi-u.5
for
100264234
ppo-u.5
for
18104845
mtr-u.5
for
11420388
sly-u.5
for
101260321
sot-r.1
for
102583488
nta-r.1
for
107795649
nta-r.1
for
107781603
nta-r.1
for
107779663
osa-u.5
for
4343225
zma-u.5
for
118476414
tae-r.2
for
123128857
tae-r.2
for
123146002
tae-r.2
for
123139355
hvu-r.1
for
123402400
sbi-r.1
for
8074231
bdi-r.1
for
100829270
cre-r.1
for
CHLRE_17g722500v5


Ortholog ID: 7269
Species ath ath bra bra bna bna bna ghi ghi cit gma gma vvi ppo mtr sly sot nta nta nta osa zma tae tae tae hvu sbi bdi cre
Symbol AT4G07390 AT5G59470 LOC103858459 LOC103851577 LOC106361832 LOC106388430 LOC106417331 LOC107958152 LOC107905602 LOC102622747 LOC100806764 LOC100787632 LOC100264234 LOC18104845 LOC11420388 LOC101260321 LOC102583488 LOC107795649 LOC107781603 LOC107779663 LOC4343225 LOC118476414 LOC123128857 LOC123146002 LOC123139355 LOC123402400 LOC8074231 LOC100829270 CHLRE_17g722500v5
Function* Mannose-P-dolichol utilization defect 1 protein Mannose-P-dolichol utilization defect 1 protein mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 1 mannose-P-dolichol utilization defect 1 protein homolog 1-like mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 1 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog mannose-P-dolichol utilization defect 1 protein homolog mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2-like mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 mannose-P-dolichol utilization defect 1 protein homolog 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 4
bna03013 Nucleocytoplasmic transport 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 4
bna03013 Nucleocytoplasmic transport 2
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03060 Protein export 2
ghi04120 Ubiquitin mediated proteolysis 2
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00260 Glycine, serine and threonine metabolism 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00190 Oxidative phosphorylation 2
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 17
gma00510 N-Glycan biosynthesis 11
gma00513 Various types of N-glycan biosynthesis 11
gma03060 Protein export 2
gma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00510 N-Glycan biosynthesis 3
gma00513 Various types of N-glycan biosynthesis 3
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo03050 Proteasome 2
ppo00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 12
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
sly01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03015 mRNA surveillance pathway 4
nta04136 Autophagy - other 4
nta04382 Cornified envelope formation 4
nta04130 SNARE interactions in vesicular transport 3
nta04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta00240 Pyrimidine metabolism 2
nta01240 Biosynthesis of cofactors 2
nta04130 SNARE interactions in vesicular transport 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04145 Phagosome 3
osa04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04142 Lysosome 2
zma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae03015 mRNA surveillance pathway 2
tae04136 Autophagy - other 2
tae04382 Cornified envelope formation 2
tae03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 3
tae00562 Inositol phosphate metabolism 3
tae03040 Spliceosome 2
tae03015 mRNA surveillance pathway 2
tae04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 6
tae00562 Inositol phosphate metabolism 3
tae03015 mRNA surveillance pathway 2
tae04136 Autophagy - other 2
tae04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
hvu04144 Endocytosis 2
hvu04145 Phagosome 2
hvu04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00600 Sphingolipid metabolism 2
sbi04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 4
cre00510 N-Glycan biosynthesis 3
cre00514 Other types of O-glycan biosynthesis 2
cre00513 Various types of N-glycan biosynthesis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 826170 836066 103858459 103851577 106361832 106388430 106417331 107958152 107905602 102622747 100806764 100787632 100264234 18104845 11420388 101260321 102583488 107795649 107781603 107779663 4343225 118476414 123128857 123146002 123139355 123402400 8074231 100829270 5722714
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