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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   VAL3   VP1/ABI3-like 3 
 ath-u.5   VAL3   VP1/ABI3-like 3 
 ath-r.7   VAL3   VP1/ABI3-like 3 
 ath-m.9   VAL3   VP1/ABI3-like 3 
 ath-e.2   VAL3   VP1/ABI3-like 3 
 ath-m.4.bio   VAL3   VP1/ABI3-like 3 
 ath-m.4.hor   VAL3   VP1/ABI3-like 3 
 ath-m.4.lig   VAL3   VP1/ABI3-like 3 
 ath-m.4.str   VAL3   VP1/ABI3-like 3 
 bra-r.6   103859136   B3 domain-containing transcription factor VAL3 
 bna-r.1   106375725   B3 domain-containing transcription factor VAL3-like 
 bna-r.1   106440033   B3 domain-containing transcription factor VAL3 

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Top 50 coexpressed genes to VAL3 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to VAL3 (ath-m.4.tis coexpression data)

CoexMap"828240"


athVAL3 | Entrez gene ID : 828240      
Species ath bra bna zma ghi nta vvi osa sot hvu gma tae sly bdi ppo cit sbi mtr cre
Paralog 9 1 2 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048366 [list] [network] leaf development  (371 genes)  IMP  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (1618 genes)  ISS  
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (1620 genes)  ISS  
Protein NP_001320023.1 [sequence] [blastp]
NP_001329314.1 [sequence] [blastp]
NP_193886.3 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  mito 1,  cysk 1  (predict for NP_001320023.1)
nucl 6,  cyto 1,  mito 1  (predict for NP_001329314.1)
nucl 5,  chlo 1,  plas 1,  mito 1,  extr 1,  golg 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for NP_193886.3)
Subcellular
localization
TargetP
chlo 4,  scret 3  (predict for NP_001320023.1)
chlo 4,  scret 3  (predict for NP_001329314.1)
chlo 4,  scret 3  (predict for NP_193886.3)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
VAL3
ath-u.5
for
VAL3
ath-r.7
for
VAL3
ath-m.9
for
VAL3
ath-e.2
for
VAL3
ath-m.4.bio
for
VAL3
ath-m.4.hor
for
VAL3
ath-m.4.lig
for
VAL3
ath-m.4.str
for
VAL3
bra-r.6
for
103859136
bna-r.1
for
106375725
bna-r.1
for
106440033


Ortholog ID: 22815
Species ath bra bna bna
Symbol VAL3 LOC103859136 LOC106375725 LOC106440033
Function* VP1/ABI3-like 3 B3 domain-containing transcription factor VAL3 B3 domain-containing transcription factor VAL3-like B3 domain-containing transcription factor VAL3
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03440 Homologous recombination 2
ath03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 4
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04712 Circadian rhythm - plant 6
bna03082 ATP-dependent chromatin remodeling 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828240 103859136 106375725 106440033
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