ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.tis	AT4G25770	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT4G25770	alpha/beta-Hydrolases superfamily protein
ath-r.7	AT4G25770	alpha/beta-Hydrolases superfamily protein
ath-m.9	AT4G25770	alpha/beta-Hydrolases superfamily protein
ath-e.2	AT4G25770	alpha/beta-Hydrolases superfamily protein
ath-m.4.bio	AT4G25770	alpha/beta-Hydrolases superfamily protein
ath-m.4.hor	AT4G25770	alpha/beta-Hydrolases superfamily protein
ath-m.4.lig	AT4G25770	alpha/beta-Hydrolases superfamily protein
ath-m.4.str	AT4G25770	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT5G51180	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT1G10040	alpha/beta-Hydrolases superfamily protein
ath-u.5	AT1G29120	Hydrolase-like protein family
bra-r.6	103828981	putative lipase ROG1
bra-r.6	103835299	uncharacterized LOC103835299
bra-r.6	103863504	uncharacterized LOC103863504
bna-r.1	111204688	uncharacterized LOC111204688
bna-r.1	125575602	uncharacterized LOC125575602
bna-r.1	106416168	putative lipase ROG1
ghi-r.1	107949679	lipid droplet phospholipase 1
ghi-r.1	107947339	lipid droplet phospholipase 1
ghi-r.1	107920881	putative lipase YDL109C
cit-r.1	102613702	uncharacterized LOC102613702
cit-r.1	102631206	lipid droplet phospholipase 1
cit-r.1	102622547	uncharacterized LOC102622547
gma-u.5	100792195	uncharacterized LOC100792195
gma-u.5	100790076	uncharacterized LOC100790076
gma-u.5	100816943	putative lipase ROG1
vvi-u.5	104882510	putative lipase ROG1
vvi-u.5	100266871	putative lipase C4A8.10
vvi-u.5	100257840	putative lipase ROG1
ppo-u.5	7472312	putative lipase C4A8.10
ppo-u.5	7472626	putative lipase ROG1
ppo-u.5	7477796	lipid droplet phospholipase 1
mtr-u.5	11429289	lipid droplet phospholipase 1
mtr-u.5	11432742	putative lipase ROG1
mtr-u.5	120577867	lipid droplet phospholipase 1
sly-u.5	101267248	putative lipase ROG1
sly-u.5	101245256	lipid droplet phospholipase 1-like
sly-u.5	101247092	lipid droplet phospholipase 1
sot-r.1	102586417	putative lipase YOR059C
sot-r.1	102581500	uncharacterized LOC102581500
sot-r.1	102592752	putative lipase YOR059C
nta-r.1	107827200	uncharacterized LOC107827200
nta-r.1	107814737	lipid droplet phospholipase 1
nta-r.1	107799608	uncharacterized LOC107799608
osa-u.5	4330955	putative lipase C4A8.10
osa-u.5	4340169	putative lipase C4A8.10
osa-u.5	4344647	lipid droplet phospholipase 1
zma-u.5	100284571	serine esterase family protein
zma-u.5	100285688	serine esterase family protein
zma-u.5	100281777	serine esterase family protein
tae-r.2	123137733	putative lipase ROG1
tae-r.2	123138841	putative lipase C4A8.10
tae-r.2	123144991	putative lipase ROG1
hvu-r.1	123409324	putative lipase ROG1
hvu-r.1	123410632	lipid droplet phospholipase 1
hvu-r.1	123407625	putative lipase ROG1
sbi-r.1	8080628	uncharacterized LOC8080628
sbi-r.1	8081957	uncharacterized LOC8081957
sbi-r.1	8067819	putative lipase ROG1
bdi-r.1	100842570	uncharacterized LOC100842570
bdi-r.1	100835435	putative lipase ROG1
bdi-r.1	100843878	putative lipase C4A8.10
cre-r.1	CHLRE_12g499950v5	uncharacterized protein
cre-r.1	CHLRE_04g219200v5	uncharacterized protein

Top 50 coexpressed genes to AT4G25770 (ath-m.4.tis coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to AT4G25770 (ath-m.4.tis coexpression data)

CoexMap"828682"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005829 [list] [network] cytosol	(2593 genes)	HDA
GO:0009507 [list] [network] chloroplast	(5014 genes)	ISM

GO MF

Protein

NP_001320067.1 [sequence] [blastp]
NP_194307.2 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9, mito 1	(predict for NP_001320067.1)
chlo 8, mito 1	(predict for NP_194307.2)

Subcellular
localization
TargetP

chlo 8	(predict for NP_001320067.1)
chlo 8	(predict for NP_194307.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.tis for AT4G25770	ath-u.5 for AT4G25770	ath-r.7 for AT4G25770	ath-m.9 for AT4G25770	ath-e.2 for AT4G25770	ath-m.4.bio for AT4G25770	ath-m.4.hor for AT4G25770	ath-m.4.lig for AT4G25770	ath-m.4.str for AT4G25770	ath-u.5 for AT5G51180	ath-u.5 for AT1G10040	ath-u.5 for AT1G29120	bra-r.6 for 103828981	bra-r.6 for 103835299	bra-r.6 for 103863504	bna-r.1 for 111204688	bna-r.1 for 125575602	bna-r.1 for 106416168	ghi-r.1 for 107949679	ghi-r.1 for 107947339	ghi-r.1 for 107920881	cit-r.1 for 102613702	cit-r.1 for 102631206	cit-r.1 for 102622547	gma-u.5 for 100792195	gma-u.5 for 100790076	gma-u.5 for 100816943	vvi-u.5 for 104882510	vvi-u.5 for 100266871	vvi-u.5 for 100257840	ppo-u.5 for 7472312	ppo-u.5 for 7472626	ppo-u.5 for 7477796	mtr-u.5 for 11429289	mtr-u.5 for 11432742	mtr-u.5 for 120577867	sly-u.5 for 101267248	sly-u.5 for 101245256	sly-u.5 for 101247092	sot-r.1 for 102586417	sot-r.1 for 102581500	sot-r.1 for 102592752	nta-r.1 for 107827200	nta-r.1 for 107814737	nta-r.1 for 107799608	osa-u.5 for 4330955	osa-u.5 for 4340169	osa-u.5 for 4344647	zma-u.5 for 100284571	zma-u.5 for 100285688	zma-u.5 for 100281777	tae-r.2 for 123137733	tae-r.2 for 123138841	tae-r.2 for 123144991	hvu-r.1 for 123409324	hvu-r.1 for 123410632	hvu-r.1 for 123407625	sbi-r.1 for 8080628	sbi-r.1 for 8081957	sbi-r.1 for 8067819	bdi-r.1 for 100842570	bdi-r.1 for 100835435	bdi-r.1 for 100843878	cre-r.1 for CHLRE_12g499950v5	cre-r.1 for CHLRE_04g219200v5

Ortholog

Ortholog ID: 548

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

alpha/beta-Hydrolases superfamily protein

Hydrolase-like protein family

uncharacterized LOC103835299

uncharacterized LOC103863504

putative lipase ROG1

lipid droplet phospholipase 1

uncharacterized LOC121230881

putative lipase YDL109C

lipid droplet phospholipase 1

uncharacterized LOC102622547

putative lipase ROG1

uncharacterized LOC100790076

putative lipase ROG1

uncharacterized LOC100792868

putative lipase ROG1

putative lipase C4A8.10

putative lipase ROG1

lipid droplet phospholipase 1

uncharacterized LOC18107770

putative lipase ROG1

lipid droplet phospholipase 1

putative lipase YDL109C

putative lipase ROG1

lipid droplet phospholipase 1-like

lipid droplet phospholipase 1

putative lipase YOR059C

putative lipase ROG1

putative lipase YOR059C

uncharacterized LOC107827200

putative lipase ROG1

uncharacterized LOC107791666

putative lipase C4A8.10

lipid droplet phospholipase 1

uncharacterized LOC4345712

serine esterase family protein

uncharacterized LOC100191604

Hydrolase-like protein family

lipid droplet phospholipase 1

uncharacterized LOC123164684

uncharacterized LOC123167241

putative lipase ROG1

uncharacterized LOC123403023

putative lipase ROG1

uncharacterized LOC8081957

putative lipase ROG1

putative lipase YDR444W

uncharacterized LOC100842570

putative lipase C4A8.10

putative lipase ROG1

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03015	mRNA surveillance pathway	2
ath04136	Autophagy - other	2
ath04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	4
ath04075	Plant hormone signal transduction	4
ath00010	Glycolysis / Gluconeogenesis	3
ath00620	Pyruvate metabolism	2
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03018	RNA degradation	3
bra04075	Plant hormone signal transduction	2
bra03083	Polycomb repressive complex	2
bra03250	Viral life cycle - HIV-1	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00970	Aminoacyl-tRNA biosynthesis	3
ghi00860	Porphyrin metabolism	2
ghi01240	Biosynthesis of cofactors	2
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04136	Autophagy - other	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00564	Glycerophospholipid metabolism	3
cit00051	Fructose and mannose metabolism	2
cit00520	Amino sugar and nucleotide sugar metabolism	2
cit01250	Biosynthesis of nucleotide sugars	2
cit01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04136	Autophagy - other	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00562	Inositol phosphate metabolism	2
vvi04070	Phosphatidylinositol signaling system	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2
ppo01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	3
ppo04144	Endocytosis	2
ppo00190	Oxidative phosphorylation	2
ppo04142	Lysosome	2
ppo04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04142	Lysosome	2
mtr00620	Pyruvate metabolism	2
mtr00270	Cysteine and methionine metabolism	2
mtr01230	Biosynthesis of amino acids	2
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot00511	Other glycan degradation	2
sot00531	Glycosaminoglycan degradation	2
sot00600	Sphingolipid metabolism	2
sot00604	Glycosphingolipid biosynthesis - ganglio series	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03083	Polycomb repressive complex	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00630	Glyoxylate and dicarboxylate metabolism	3
zma01200	Carbon metabolism	3
zma00280	Valine, leucine and isoleucine degradation	3
zma00620	Pyruvate metabolism	2
zma00640	Propanoate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00940	Phenylpropanoid biosynthesis	3
tae00941	Flavonoid biosynthesis	3
tae00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00195	Photosynthesis	7
sbi03010	Ribosome	6
sbi03008	Ribosome biogenesis in eukaryotes	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

828682

835192

839787

103835299

103863504

103864858

106416168

106442810

106362397

121230881

107951131

107933450

102631206

102622547

102616182

100790076

100816943

100792868

104882510

100266871

100257840

7477796

18097076

18107770

11432742

120577867

11418655

101267248

101245256

101247092

102586417

102600845

102598167

107827200

107781685

107791666

4340169

4344647

4345712

100284571

100191604

100381992

123162628

123164684

123167241

123407625

123403023

123401248

8081957

8067819

8071335

100842570

100843878

100845903

5716371

5717737

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	12	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	2

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT4G25770 (ath-m.4.tis coexpression data)

Top 50 enrichment test to AT4G25770 (ath-m.4.tis coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**