ATTED-II : GeneCoexpression result

Select Species^**

OK

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.tis	AT4G28230	uncharacterized protein
ath-u.5	AT4G28230	uncharacterized protein
ath-r.7	AT4G28230	uncharacterized protein
ath-m.9	AT4G28230	uncharacterized protein
ath-e.2	AT4G28230	uncharacterized protein
ath-m.4.bio	AT4G28230	uncharacterized protein
ath-m.4.hor	AT4G28230	uncharacterized protein
ath-m.4.lig	AT4G28230	uncharacterized protein
ath-m.4.str	AT4G28230	uncharacterized protein
bra-r.6	103867917	uncharacterized LOC103867917
bna-r.1	106452765	uncharacterized LOC106452765
bna-r.1	BNAC01G20740D	uncharacterized BNAC01G20740D
ghi-r.1	107909249	uncharacterized LOC107909249
ghi-r.1	107886742	uncharacterized LOC107886742
cit-r.1	102613031	uncharacterized LOC102613031
gma-u.5	102668024	uncharacterized LOC102668024
gma-u.5	102667127	myb-like protein D
vvi-u.5	100264907	uncharacterized LOC100264907
ppo-u.5	7458860	uncharacterized LOC7458860
ppo-u.5	7494437	uncharacterized LOC7494437
mtr-u.5	11423016	uncharacterized LOC11423016
sly-u.5	101259172	uncharacterized LOC101259172
sot-r.1	102583657	uncharacterized LOC102583657
nta-r.1	107818478	uncharacterized LOC107818478
nta-r.1	107832430	uncharacterized LOC107832430

close

Top 50 coexpressed genes to AT4G28230 (ath-m.4.tis coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

close

close

Top 50 enrichment test to AT4G28230 (ath-m.4.tis coexpression data)

CoexMap"828938"

LCNloc

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

Protein

NP_194552.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9, cyto_nucl 5

(predict for NP_194552.1)

Subcellular
localization
TargetP

other 7

(predict for NP_194552.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.tis for AT4G28230	ath-u.5 for AT4G28230	ath-r.7 for AT4G28230	ath-m.9 for AT4G28230	ath-e.2 for AT4G28230	ath-m.4.bio for AT4G28230	ath-m.4.hor for AT4G28230	ath-m.4.lig for AT4G28230	ath-m.4.str for AT4G28230	bra-r.6 for 103867917	bna-r.1 for 106452765	bna-r.1 for BNAC01G20740D	ghi-r.1 for 107909249	ghi-r.1 for 107886742	cit-r.1 for 102613031	gma-u.5 for 102668024	gma-u.5 for 102667127	vvi-u.5 for 100264907	ppo-u.5 for 7458860	ppo-u.5 for 7494437	mtr-u.5 for 11423016	sly-u.5 for 101259172	sot-r.1 for 102583657	nta-r.1 for 107818478	nta-r.1 for 107832430

Ortholog

Ortholog ID: 12919

Species

ath

bra

bna

bna

ghi

ghi

cit

gma

gma

vvi

ppo

ppo

mtr

sly

sot

nta

nta

Symbol

Function^*

uncharacterized protein

uncharacterized LOC103867917

uncharacterized LOC106452765

uncharacterized BNAC01G20740D

uncharacterized LOC107909249

uncharacterized LOC107886742

uncharacterized LOC102613031

uncharacterized LOC102668024

myb-like protein D

uncharacterized LOC100264907

uncharacterized LOC7458860

uncharacterized LOC7494437

uncharacterized LOC11423016

uncharacterized LOC101259172

uncharacterized LOC102583657

uncharacterized LOC107818478

uncharacterized LOC107832430

Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	4
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04130	SNARE interactions in vesicular transport	4
bna04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03030	DNA replication	4
cit04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	2
nta04814	Motor proteins	2

Expression

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Expression pattern

Entrez Gene ID^*

828938

103867917

106452765

106376158

107909249

107886742

102613031

102668024

102667127

100264907

7458860

7494437

11423016

101259172

102583657

107818478

107832430

The preparation time of this page was 0.1 [sec].