ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.tis	AT4G38340	Plant regulator RWP-RK family protein
ath-u.5	AT4G38340	Plant regulator RWP-RK family protein
ath-r.7	AT4G38340	Plant regulator RWP-RK family protein
ath-m.9	AT4G38340	Plant regulator RWP-RK family protein
ath-e.2	AT4G38340	Plant regulator RWP-RK family protein
ath-m.4.bio	AT4G38340	Plant regulator RWP-RK family protein
ath-m.4.hor	AT4G38340	Plant regulator RWP-RK family protein
ath-m.4.lig	AT4G38340	Plant regulator RWP-RK family protein
ath-m.4.str	AT4G38340	Plant regulator RWP-RK family protein
bra-r.6	103828104	protein NLP3
bna-r.1	106435546	protein NLP3
bna-r.1	125575781	protein NLP3-like

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(1618 genes)

TAS

GO CC

GO:0005634 [list] [network] nucleus

(10367 genes)

ISM

GO MF

GO:0000987 [list] [network] cis-regulatory region sequence-specific DNA binding	(55 genes)	IPI
GO:0003700 [list] [network] DNA-binding transcription factor activity	(1620 genes)	IEA ISS

Protein

NP_001329471.1 [sequence] [blastp]
NP_195547.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 10	(predict for NP_001329471.1)
nucl 6, chlo 2, cysk 1	(predict for NP_195547.1)

Subcellular
localization
TargetP

other 8	(predict for NP_001329471.1)
other 3	(predict for NP_195547.1)

Gene expression

All samples

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.tis for AT4G38340	ath-u.5 for AT4G38340	ath-r.7 for AT4G38340	ath-m.9 for AT4G38340	ath-e.2 for AT4G38340	ath-m.4.bio for AT4G38340	ath-m.4.hor for AT4G38340	ath-m.4.lig for AT4G38340	ath-m.4.str for AT4G38340	bra-r.6 for 103828104	bna-r.1 for 106435546	bna-r.1 for 125575781