Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT5G04920   EAP30/Vps36 family protein 
 ath-u.5   AT5G04920   EAP30/Vps36 family protein 
 ath-r.7   AT5G04920   EAP30/Vps36 family protein 
 ath-m.9   AT5G04920   EAP30/Vps36 family protein 
 ath-e.2   AT5G04920   EAP30/Vps36 family protein 
 ath-m.4.bio   AT5G04920   EAP30/Vps36 family protein 
 ath-m.4.hor   AT5G04920   EAP30/Vps36 family protein 
 ath-m.4.lig   AT5G04920   EAP30/Vps36 family protein 
 ath-m.4.str   AT5G04920   EAP30/Vps36 family protein 
 bra-r.6   103847243   vacuolar protein sorting-associated protein 36 
 bna-r.1   106440641   vacuolar protein sorting-associated protein 36 
 bna-r.1   106419460   vacuolar protein sorting-associated protein 36 
 ghi-r.1   107940524   vacuolar protein sorting-associated protein 36 
 ghi-r.1   107931448   vacuolar protein sorting-associated protein 36 
 ghi-r.1   107921778   vacuolar protein sorting-associated protein 36 
 cit-r.1   127901775   vacuolar protein sorting-associated protein 36 
 gma-u.5   100783044   vacuolar protein sorting-associated protein 36 
 vvi-u.5   100267752   vacuolar protein sorting-associated protein 36 
 ppo-u.5   7491585   vacuolar protein sorting-associated protein 36 
 mtr-u.5   11410802   vacuolar protein sorting-associated protein 36 
 sly-u.5   101251515   vacuolar protein sorting-associated protein 36 
 sot-r.1   102599588   vacuolar protein sorting-associated protein 36 
 nta-r.1   107817722   vacuolar protein sorting-associated protein 36 
 nta-r.1   107817661   vacuolar protein sorting-associated protein 36 
 osa-u.5   4327592   vacuolar protein sorting-associated protein 36 
 zma-u.5   100191871   uncharacterized LOC100191871 
 zma-u.5   103651086   vacuolar protein sorting-associated protein 36 
 tae-r.2   123071161   vacuolar protein sorting-associated protein 36 
 tae-r.2   123079520   vacuolar protein sorting-associated protein 36 
 tae-r.2   123062387   vacuolar protein sorting-associated protein 36 
 hvu-r.1   123444676   vacuolar protein sorting-associated protein 36 
 sbi-r.1   8055284   vacuolar protein sorting-associated protein 36 
 bdi-r.1   100828067   vacuolar protein sorting-associated protein 36 
 cre-r.1   CHLRE_03g159750v5   uncharacterized protein 

close


Top 50 coexpressed genes to AT5G04920 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to AT5G04920 (ath-m.4.tis coexpression data)

CoexMap"830374"


athAT5G04920 | Entrez gene ID : 830374      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 9 1 2 3 1 1 1 1 1 1 1 2 1 2 3 1 1 1 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ath04144 [list] [network] Endocytosis (156 genes)
GO BP
GO:0032509 [list] [network] endosome transport via multivesicular body sorting pathway  (17 genes)  IEA  
GO:0071985 [list] [network] multivesicular body sorting pathway  (20 genes)  IMP  
GO:0007033 [list] [network] vacuole organization  (45 genes)  IMP  
GO:0090351 [list] [network] seedling development  (137 genes)  IMP  
GO:0016192 [list] [network] vesicle-mediated transport  (246 genes)  ISS  
GO:0009793 [list] [network] embryo development ending in seed dormancy  (569 genes)  IMP  
GO CC
GO:0000814 [list] [network] ESCRT II complex  (3 genes)  ISS  
GO:0005769 [list] [network] early endosome  (26 genes)  IDA  
GO:0005770 [list] [network] late endosome  (43 genes)  IDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
GO:0043130 [list] [network] ubiquitin binding  (38 genes)  IDA  
GO:0005515 [list] [network] protein binding  (5363 genes)  IPI  
Protein NP_196112.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 3,  cyto 3,  cyto_nucl 3,  chlo 2  (predict for NP_196112.1)
Subcellular
localization
TargetP
chlo 5,  other 5  (predict for NP_196112.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT5G04920
ath-u.5
for
AT5G04920
ath-r.7
for
AT5G04920
ath-m.9
for
AT5G04920
ath-e.2
for
AT5G04920
ath-m.4.bio
for
AT5G04920
ath-m.4.hor
for
AT5G04920
ath-m.4.lig
for
AT5G04920
ath-m.4.str
for
AT5G04920
bra-r.6
for
103847243
bna-r.1
for
106440641
bna-r.1
for
106419460
ghi-r.1
for
107940524
ghi-r.1
for
107931448
ghi-r.1
for
107921778
cit-r.1
for
127901775
gma-u.5
for
100783044
vvi-u.5
for
100267752
ppo-u.5
for
7491585
mtr-u.5
for
11410802
sly-u.5
for
101251515
sot-r.1
for
102599588
nta-r.1
for
107817722
nta-r.1
for
107817661
osa-u.5
for
4327592
zma-u.5
for
100191871
zma-u.5
for
103651086
tae-r.2
for
123071161
tae-r.2
for
123079520
tae-r.2
for
123062387
hvu-r.1
for
123444676
sbi-r.1
for
8055284
bdi-r.1
for
100828067
cre-r.1
for
CHLRE_03g159750v5


Ortholog ID: 8584
Species ath bra bna bna ghi ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol AT5G04920 LOC103847243 LOC106440641 LOC106419460 LOC107940524 LOC107931448 LOC107921778 LOC127901775 LOC100783044 LOC100267752 LOC7491585 LOC11410802 LOC101251515 LOC102599588 LOC107817722 LOC107817661 LOC4327592 LOC100191871 LOC103651086 LOC123071161 LOC123079520 LOC123062387 LOC123444676 LOC8055284 LOC100828067 CHLRE_03g159750v5
Function* EAP30/Vps36 family protein vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 uncharacterized LOC100191871 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 vacuolar protein sorting-associated protein 36 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 2
bna03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi00562 Inositol phosphate metabolism 3
ghi04070 Phosphatidylinositol signaling system 3
ghi03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi03410 Base excision repair 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 4
cit04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03250 Viral life cycle - HIV-1 2
gma00190 Oxidative phosphorylation 2
gma04145 Phagosome 2
gma04144 Endocytosis 2
gma03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 3
vvi03272 Virion - Hepatitis viruses 2
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03082 ATP-dependent chromatin remodeling 2
ppo04144 Endocytosis 2
ppo03018 RNA degradation 2
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 3
nta04144 Endocytosis 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 2
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 3
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00900 Terpenoid backbone biosynthesis 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 5
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04130 SNARE interactions in vesicular transport 3
tae04141 Protein processing in endoplasmic reticulum 3
tae04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 4
hvu00510 N-Glycan biosynthesis 2
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 7
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
bdi00190 Oxidative phosphorylation 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00071 Fatty acid degradation 4
cre00592 alpha-Linolenic acid metabolism 4
cre01212 Fatty acid metabolism 4
cre01040 Biosynthesis of unsaturated fatty acids 3
cre01200 Carbon metabolism 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 830374 103847243 106440641 106419460 107940524 107931448 107921778 127901775 100783044 100267752 7491585 11410802 101251515 102599588 107817722 107817661 4327592 100191871 103651086 123071161 123079520 123062387 123444676 8055284 100828067 5723002
The preparation time of this page was 0.2 [sec].