ATTED-II : GeneCoexpression result

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.tis	AT5G39130	RmlC-like cupins superfamily protein
ath-u.5	AT5G39130	RmlC-like cupins superfamily protein
ath-r.7	AT5G39130	RmlC-like cupins superfamily protein
ath-m.9	AT5G39130	RmlC-like cupins superfamily protein
ath-e.2	AT5G39130	RmlC-like cupins superfamily protein
ath-m.4.bio	AT5G39130	RmlC-like cupins superfamily protein
ath-m.4.hor	AT5G39130	RmlC-like cupins superfamily protein
ath-m.4.lig	AT5G39130	RmlC-like cupins superfamily protein
ath-m.4.str	AT5G39130	RmlC-like cupins superfamily protein
ath-u.5	AT5G39160	RmlC-like cupins superfamily protein
ath-u.5	GER2	germin-like protein 2
bra-r.6	103854691	germin-like protein subfamily 1 member 16
bra-r.6	103864208	germin-like protein subfamily 1 member 16
bna-r.1	111200514	germin-like protein subfamily 1 member 11
bna-r.1	106395120	germin-like protein subfamily 1 member 16
bna-r.1	106404722	germin-like protein subfamily 1 member 13
ghi-r.1	107892156	germin-like protein subfamily 1 member 11
ghi-r.1	107954485	germin-like protein subfamily 1 member 20
cit-r.1	102619511	germin-like protein subfamily 1 member 17
gma-u.5	GER6	germin-like protein
gma-u.5	GER3	germin-like protein
gma-u.5	GER11	germin-like protein
ppo-u.5	7487706	germin-like protein subfamily 1 member 17
mtr-u.5	11426661	germin-like protein subfamily 1 member 7
mtr-u.5	11414568	putative germin-like protein 2-1
mtr-u.5	11419235	germin-like protein subfamily 1 member 7
sly-u.5	101253729	germin-like protein subfamily 1 member 14
sly-u.5	101253431	putative germin-like protein 2-1
sot-r.1	102597861	putative germin-like protein 2-1
sot-r.1	102598504	putative germin-like protein 2-1
nta-r.1	107831484	germin-like protein subfamily 1 member 14
osa-u.5	4344844	germin-like protein 8-8
osa-u.5	9272376	germin-like protein 8-9
osa-u.5	112935981	germin-like protein 8-10
zma-u.5	103653015	putative germin-like protein 12-4
zma-u.5	103653014	putative germin-like protein 12-4
zma-u.5	103653016	germin-like protein 8-11
tae-r.2	123108527	germin-like protein 8-11
tae-r.2	123108518	germin-like protein 8-11
hvu-r.1	123450107	germin-like protein 8-11
hvu-r.1	123450105	germin-like protein 8-5
hvu-r.1	123450104	germin-like protein 8-5
sbi-r.1	8071133	germin-like protein 12-2
sbi-r.1	8071126	germin-like protein 12-2
sbi-r.1	8155547	germin-like protein 12-2

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0005576 [list] [network] extracellular region

(3158 genes)

ISM

GO MF

GO:0030145 [list] [network] manganese ion binding

(42 genes)

IEA

Protein

NP_198729.1 [sequence] [blastp]

Subcellular
localization
wolf

extr 3, chlo 2, cyto 1, mito 1, E.R. 1, cyto_E.R. 1

(predict for NP_198729.1)

Subcellular
localization
TargetP

scret 9

(predict for NP_198729.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.tis for AT5G39130	ath-u.5 for AT5G39130	ath-r.7 for AT5G39130	ath-m.9 for AT5G39130	ath-e.2 for AT5G39130	ath-m.4.bio for AT5G39130	ath-m.4.hor for AT5G39130	ath-m.4.lig for AT5G39130	ath-m.4.str for AT5G39130	ath-u.5 for AT5G39160	ath-u.5 for GER2	bra-r.6 for 103854691	bra-r.6 for 103864208	bna-r.1 for 111200514	bna-r.1 for 106395120	bna-r.1 for 106404722	ghi-r.1 for 107892156	ghi-r.1 for 107954485	cit-r.1 for 102619511	gma-u.5 for GER6	gma-u.5 for GER3	gma-u.5 for GER11	ppo-u.5 for 7487706	mtr-u.5 for 11426661	mtr-u.5 for 11414568	mtr-u.5 for 11419235	sly-u.5 for 101253729	sly-u.5 for 101253431	sot-r.1 for 102597861	sot-r.1 for 102598504	nta-r.1 for 107831484	osa-u.5 for 4344844	osa-u.5 for 9272376	osa-u.5 for 112935981	zma-u.5 for 103653015	zma-u.5 for 103653014	zma-u.5 for 103653016	tae-r.2 for 123108527	tae-r.2 for 123108518	hvu-r.1 for 123450107	hvu-r.1 for 123450105	hvu-r.1 for 123450104	sbi-r.1 for 8071133	sbi-r.1 for 8071126	sbi-r.1 for 8155547

Ortholog

Ortholog ID: 16

Species

ath

bra

bna

ghi

cit

gma

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

GER6

GER11

Function^*

RmlC-like cupins superfamily protein

germin-like protein subfamily 1 member 13

germin-like protein subfamily 1 member 7

germin-like protein subfamily 1 member 11

germin-like protein subfamily 1 member 16

germin-like protein subfamily 1 member 8

germin-like protein subfamily 1 member 14

germin-like protein subfamily 1 member 7

germin-like protein subfamily 1 member 17

germin-like protein

putative germin-like protein 2-1

germin-like protein subfamily 1 member 7

germin-like protein subfamily 1 member 11

putative germin-like protein 2-1

germin-like protein subfamily 1 member 13

germin-like protein subfamily 1 member 14

putative germin-like protein 2-1

germin-like protein subfamily 1 member 20

germin-like protein 8-2

germin-like protein 8-5

germin-like protein 12-2

putative germin-like protein 12-4

germin-like protein 8-11

germin-like protein 12-2

germin-like protein 8-8

germin-like protein 8-7

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00940	Phenylpropanoid biosynthesis	2
bra04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04626	Plant-pathogen interaction	6
bna00430	Taurine and hypotaurine metabolism	5
bna04142	Lysosome	4
bna04016	MAPK signaling pathway - plant	2
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	2
ghi04070	Phosphatidylinositol signaling system	2
ghi04075	Plant hormone signal transduction	2
ghi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00562	Inositol phosphate metabolism	2
cit01250	Biosynthesis of nucleotide sugars	2
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00940	Phenylpropanoid biosynthesis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04626	Plant-pathogen interaction	2

Expression

Expression pattern

Entrez Gene ID^*

819765

833883

833885

103863820

103850001

111200514

125607967

106359567

107956482

107944453

102617089

100799339

100796041

11414568

11422481

11425316

101253431

101253136

102599490

102585861

107820589

107817513

4344838

4344841

103641113

103641112

123174151

123174149

123450114

110437122

110437123

110437126

100825109

100842050

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to AT5G39130 (ath-m.4.tis coexpression data)

Top 50 enrichment test to AT5G39130 (ath-m.4.tis coexpression data)


Species	ath	bra	bna	ghi	cit	gma	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	vvi	cre
Paralog	11	2	3	2	1	3	1	3	2	2	1	3	3	2	3	3	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to AT5G39130 (ath-m.4.tis coexpression data)

Top 50 enrichment test to AT5G39130 (ath-m.4.tis coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**