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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   TRN2   Tetraspanin family protein 
 ath-u.5   TRN2   Tetraspanin family protein 
 ath-r.7   TRN2   Tetraspanin family protein 
 ath-m.9   TRN2   Tetraspanin family protein 
 ath-e.2   TRN2   Tetraspanin family protein 
 ath-m.4.bio   TRN2   Tetraspanin family protein 
 ath-m.4.hor   TRN2   Tetraspanin family protein 
 ath-m.4.lig   TRN2   Tetraspanin family protein 
 ath-m.4.str   TRN2   Tetraspanin family protein 
 bra-r.6   103839584   protein TORNADO 2 
 bra-r.6   103827717   protein TORNADO 2 
 bna-r.1   106446158   protein TORNADO 2 
 ghi-r.1   107918663   protein TORNADO 2 
 ghi-r.1   107933540   protein TORNADO 2 
 cit-r.1   102616037   protein TORNADO 2-like 
 cit-r.1   102615341   protein TORNADO 2-like 
 cit-r.1   102617877   protein TORNADO 2-like 
 gma-u.5   100791755   protein TORNADO 2 
 vvi-u.5   100266064   protein TORNADO 2 
 ppo-u.5   18094158   protein TORNADO 2 
 mtr-u.5   11444260   protein TORNADO 2 
 mtr-u.5   11423819   protein TORNADO 2 
 sly-u.5   101245482   protein TORNADO 2 
 sot-r.1   102599940   protein TORNADO 2 
 nta-r.1   107809763   protein TORNADO 2-like 
 nta-r.1   107768830   protein TORNADO 2 

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Top 50 coexpressed genes to TRN2 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to TRN2 (ath-m.4.tis coexpression data)

CoexMap"834713"


athTRN2 | Entrez gene ID : 834713      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta cre hvu tae bdi osa zma sbi
Paralog 9 2 1 2 3 1 1 1 2 1 1 2 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0009554 [list] [network] megasporogenesis  (12 genes)  IMP  
GO:0009934 [list] [network] regulation of meristem structural organization  (22 genes)  IMP  
GO:0009956 [list] [network] radial pattern formation  (28 genes)  IMP  
GO:0010305 [list] [network] leaf vascular tissue pattern formation  (29 genes)  IMP  
GO:0009933 [list] [network] meristem structural organization  (56 genes)  IMP  
GO:0010015 [list] [network] root morphogenesis  (324 genes)  IMP  
GO CC
GO:0009506 [list] [network] plasmodesma  (874 genes)  HDA  
GO:0005886 [list] [network] plasma membrane  (2598 genes)  IDA  
GO MF
Protein NP_199482.1 [sequence] [blastp]
Subcellular
localization
wolf
plas 4,  golg_plas 4,  golg 3,  E.R. 1  (predict for NP_199482.1)
Subcellular
localization
TargetP
scret 9,  other 4  (predict for NP_199482.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
TRN2
ath-u.5
for
TRN2
ath-r.7
for
TRN2
ath-m.9
for
TRN2
ath-e.2
for
TRN2
ath-m.4.bio
for
TRN2
ath-m.4.hor
for
TRN2
ath-m.4.lig
for
TRN2
ath-m.4.str
for
TRN2
bra-r.6
for
103839584
bra-r.6
for
103827717
bna-r.1
for
106446158
ghi-r.1
for
107918663
ghi-r.1
for
107933540
cit-r.1
for
102616037
cit-r.1
for
102615341
cit-r.1
for
102617877
gma-u.5
for
100791755
vvi-u.5
for
100266064
ppo-u.5
for
18094158
mtr-u.5
for
11444260
mtr-u.5
for
11423819
sly-u.5
for
101245482
sot-r.1
for
102599940
nta-r.1
for
107809763
nta-r.1
for
107768830


Ortholog ID: 5182
Species ath bra bra ghi ghi cit cit cit gma vvi ppo mtr mtr sly sot nta nta
Symbol TRN2 LOC103839584 LOC103827717 LOC107918663 LOC107933540 LOC102616037 LOC102615341 LOC102617877 LOC100791755 LOC100266064 LOC18094158 LOC11444260 LOC11423819 LOC101245482 LOC102599940 LOC107809763 LOC107768830
Function* Tetraspanin family protein protein TORNADO 2 protein TORNADO 2 protein TORNADO 2 protein TORNADO 2 protein TORNADO 2-like protein TORNADO 2-like protein TORNADO 2-like protein TORNADO 2 protein TORNADO 2 protein TORNADO 2 protein TORNADO 2 protein TORNADO 2 protein TORNADO 2 protein TORNADO 2 protein TORNADO 2-like protein TORNADO 2
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00500 Starch and sucrose metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00040 Pentose and glucuronate interconversions 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04517 IgSF CAM signaling 2
nta04518 Integrin signaling 2
nta04620 Toll-like receptor signaling pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 2
nta04148 Efferocytosis 2
nta04517 IgSF CAM signaling 2
nta04518 Integrin signaling 2
nta04620 Toll-like receptor signaling pathway 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 834713 103839584 103827717 107918663 107933540 102616037 102615341 102617877 100791755 100266064 18094158 11444260 11423819 101245482 102599940 107809763 107768830
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