ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ath-m.4.tis	GH9A1	glycosyl hydrolase 9A1
ath-u.5	GH9A1	glycosyl hydrolase 9A1
ath-r.7	GH9A1	glycosyl hydrolase 9A1
ath-m.9	GH9A1	glycosyl hydrolase 9A1
ath-e.2	GH9A1	glycosyl hydrolase 9A1
ath-m.4.bio	GH9A1	glycosyl hydrolase 9A1
ath-m.4.hor	GH9A1	glycosyl hydrolase 9A1
ath-m.4.lig	GH9A1	glycosyl hydrolase 9A1
ath-m.4.str	GH9A1	glycosyl hydrolase 9A1
ath-u.5	GH9A3	glycosyl hydrolase 9A3
ath-u.5	KOR2	Six-hairpin glycosidases superfamily protein
bra-r.6	103848388	endoglucanase 25
bra-r.6	103852247	endoglucanase 7
bra-r.6	103858416	endoglucanase 25
bna-r.1	106406787	endoglucanase 7
bna-r.1	111213397	endoglucanase 25
bna-r.1	106430640	endoglucanase 25
ghi-r.1	107914187	endoglucanase 25
ghi-r.1	107939379	endoglucanase 25-like
cit-r.1	102625495	endoglucanase 12
cit-r.1	102627125	endoglucanase 25
gma-u.5	CEL12	endo-1,4-beta-glucancase
gma-u.5	100794019	endoglucanase 25
gma-u.5	100804055	endoglucanase 25
vvi-u.5	109123547	endoglucanase 25
vvi-u.5	100257176	endoglucanase 12
ppo-u.5	18097081	endoglucanase 25
ppo-u.5	7460657	endoglucanase 12
mtr-u.5	11427002	endoglucanase 12
mtr-u.5	11412111	endoglucanase 25
sly-u.5	101244370	endoglucanase 25-like
sly-u.5	101254155	endoglucanase 12
sly-u.5	Cel3	endo-1,4-beta-glucanase
sot-r.1	102596032	endoglucanase 25-like
sot-r.1	102598742	endoglucanase 12
sot-r.1	102580651	endoglucanase 25-like
nta-r.1	107763290	endoglucanase 12
nta-r.1	107792901	endoglucanase 25-like
nta-r.1	107807901	endoglucanase 25
osa-u.5	4336284	endoglucanase 12-like
osa-u.5	4334029	endoglucanase 10-like
osa-u.5	4332724	endoglucanase 9-like
zma-u.5	100281146	endo-1,4-beta-glucanase
zma-u.5	100281579	uncharacterized LOC100281579
zma-u.5	100285405	endo-1,4-beta-glucanase Cel1
tae-r.2	123086949	endoglucanase 10
tae-r.2	123091027	endoglucanase 10
tae-r.2	123085756	endoglucanase 9
hvu-r.1	123448739	endoglucanase 9-like
hvu-r.1	123447698	endoglucanase 10
hvu-r.1	123427123	endoglucanase 12
sbi-r.1	8060203	endoglucanase 12
sbi-r.1	8155674	endoglucanase 12
sbi-r.1	8085976	endoglucanase 10
bdi-r.1	100846262	endoglucanase 12
bdi-r.1	100842910	endoglucanase 10
bdi-r.1	100834535	endoglucanase 9

Top 50 coexpressed genes to GH9A1 (ath-m.4.tis coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to GH9A1 (ath-m.4.tis coexpression data)

CoexMap"835035"

[Cytoscape]

Annotation

functional annotation

KEGG

ath00500 [list] [network] Starch and sucrose metabolism (172 genes)

GO BP

GO:0030244 [list] [network] cellulose biosynthetic process	(38 genes)	IMP TAS
GO:0043622 [list] [network] cortical microtubule organization	(50 genes)	IMP
GO:0042538 [list] [network] hyperosmotic salinity response	(57 genes)	IMP
GO:0009735 [list] [network] response to cytokinin	(124 genes)	IMP
GO:0009826 [list] [network] unidimensional cell growth	(310 genes)	IMP
GO:0048367 [list] [network] shoot system development	(800 genes)	IMP

GO CC

GO:0005769 [list] [network] early endosome	(26 genes)	IDA
GO:0009504 [list] [network] cell plate	(43 genes)	IDA
GO:0005802 [list] [network] trans-Golgi network	(279 genes)	HDA
GO:0005768 [list] [network] endosome	(359 genes)	HDA
GO:0005794 [list] [network] Golgi apparatus	(1198 genes)	HDA IDA
GO:0005886 [list] [network] plasma membrane	(2598 genes)	HDA

GO MF

GO:0008810 [list] [network] cellulase activity

(29 genes)

ISS

Protein

NP_199783.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 3, cyto 3, cyto_nucl 3, E.R. 2

(predict for NP_199783.1)

Subcellular
localization
TargetP

other 9

(predict for NP_199783.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target				Condition-specific^*					Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ath-m.4.tis for GH9A1	ath-u.5 for GH9A1	ath-r.7 for GH9A1	ath-m.9 for GH9A1	ath-e.2 for GH9A1	ath-m.4.bio for GH9A1	ath-m.4.hor for GH9A1	ath-m.4.lig for GH9A1	ath-m.4.str for GH9A1	ath-u.5 for GH9A3	ath-u.5 for KOR2	bra-r.6 for 103848388	bra-r.6 for 103852247	bra-r.6 for 103858416	bna-r.1 for 106406787	bna-r.1 for 111213397	bna-r.1 for 106430640	ghi-r.1 for 107914187	ghi-r.1 for 107939379	cit-r.1 for 102625495	cit-r.1 for 102627125	gma-u.5 for CEL12	gma-u.5 for 100794019	gma-u.5 for 100804055	vvi-u.5 for 109123547	vvi-u.5 for 100257176	ppo-u.5 for 18097081	ppo-u.5 for 7460657	mtr-u.5 for 11427002	mtr-u.5 for 11412111	sly-u.5 for 101244370	sly-u.5 for 101254155	sly-u.5 for Cel3	sot-r.1 for 102596032	sot-r.1 for 102598742	sot-r.1 for 102580651	nta-r.1 for 107763290	nta-r.1 for 107792901	nta-r.1 for 107807901	osa-u.5 for 4336284	osa-u.5 for 4334029	osa-u.5 for 4332724	zma-u.5 for 100281146	zma-u.5 for 100281579	zma-u.5 for 100285405	tae-r.2 for 123086949	tae-r.2 for 123091027	tae-r.2 for 123085756	hvu-r.1 for 123448739	hvu-r.1 for 123447698	hvu-r.1 for 123427123	sbi-r.1 for 8060203	sbi-r.1 for 8155674	sbi-r.1 for 8085976	bdi-r.1 for 100846262	bdi-r.1 for 100842910	bdi-r.1 for 100834535

Ortholog

Ortholog ID: 1182

Species

ath

bra

bna

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

GH9A1

GH9A3

KOR2

CEL12

Cel3

Function^*

glycosyl hydrolase 9A1

glycosyl hydrolase 9A3

Six-hairpin glycosidases superfamily protein

endoglucanase 25

endoglucanase 7

endoglucanase 25

endoglucanase 21

endoglucanase 25-like

endoglucanase 12

endoglucanase 25

endo-1,4-beta-glucancase

endoglucanase 25

endoglucanase 12

endoglucanase 25

endoglucanase 12

endoglucanase 25

endoglucanase 12

endoglucanase 25

endoglucanase 25-like

endoglucanase 12

endo-1,4-beta-glucanase

endoglucanase 25-like

endoglucanase 12

endoglucanase 25-like

endoglucanase 25

endoglucanase 25-like

endoglucanase 12-like

endoglucanase 10-like

endoglucanase 9-like

endo-1,4-beta-glucanase

uncharacterized LOC103642232

uncharacterized LOC100274698

endoglucanase 10

endoglucanase 9

endoglucanase 12

endoglucanase 9-like

endoglucanase 10

endoglucanase 12

endoglucanase 9

endoglucanase 12

endoglucanase 10

endoglucanase 9

Coexmap

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Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	6
bra00630	Glyoxylate and dicarboxylate metabolism	5
bra00380	Tryptophan metabolism	3
bra04016	MAPK signaling pathway - plant	3
bra04146	Peroxisome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00500	Starch and sucrose metabolism	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma01250	Biosynthesis of nucleotide sugars	4
gma00520	Amino sugar and nucleotide sugar metabolism	3
gma01240	Biosynthesis of cofactors	3
gma00053	Ascorbate and aldarate metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00730	Thiamine metabolism	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
gma01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00940	Phenylpropanoid biosynthesis	4
sot00941	Flavonoid biosynthesis	3
sot00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	3
sot00360	Phenylalanine metabolism	3
sot00902	Monoterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00040	Pentose and glucuronate interconversions	3
osa00053	Ascorbate and aldarate metabolism	3
osa00520	Amino sugar and nucleotide sugar metabolism	3
osa00541	Biosynthesis of various nucleotide sugars	3
osa01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	4
tae04145	Phagosome	3
tae04517	IgSF CAM signaling	3
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00500	Starch and sucrose metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00970	Aminoacyl-tRNA biosynthesis	2
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00520	Amino sugar and nucleotide sugar metabolism	5
bdi01250	Biosynthesis of nucleotide sugars	5
bdi01240	Biosynthesis of cofactors	4
bdi00040	Pentose and glucuronate interconversions	3
bdi00053	Ascorbate and aldarate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

835035

828527

842872

103848388

103852247

111213397

106388500

106444607

107939379

102625495

102627125

100037483

100805472

100807040

109123547

100257176

7460657

7491486

11427002

11412111

101244370

101254155

544032

102596032

102598742

102580651

107792901

107811383

107820555

4336284

4334029

4332724

100281146

103642232

100274698

123091027

123092246

123045894

123448739

123447698

123427123

8060203

8155674

8084557

100846262

100842910

100834535

The preparation time of this page was 0.2 [sec].


Species	ath	bra	bna	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	11	3	3	2	2	3	2	2	2	3	3	3	3	3	3	3	3	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to GH9A1 (ath-m.4.tis coexpression data)

Top 50 enrichment test to GH9A1 (ath-m.4.tis coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**