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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   AT1G09900   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-u.5   AT1G09900   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-r.7   AT1G09900   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.9   AT1G09900   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-e.2   AT1G09900   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.bio   AT1G09900   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.hor   AT1G09900   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.lig   AT1G09900   Pentatricopeptide repeat (PPR-like) superfamily protein 
 ath-m.4.str   AT1G09900   Pentatricopeptide repeat (PPR-like) superfamily protein 
 bra-r.6   103871770   pentatricopeptide repeat-containing protein At1g09900 
 bna-r.1   106346231   pentatricopeptide repeat-containing protein At1g09900 
 bna-r.1   106400864   pentatricopeptide repeat-containing protein At1g09900-like 
 ghi-r.1   107941798   pentatricopeptide repeat-containing protein At1g09900 
 ghi-r.1   121230306   pentatricopeptide repeat-containing protein At1g09900 
 gma-u.5   100790449   pentatricopeptide repeat-containing protein At1g09900 
 gma-u.5   100791459   pentatricopeptide repeat-containing protein At1g09900 
 vvi-u.5   100267729   pentatricopeptide repeat-containing protein At1g09900 
 ppo-u.5   7461840   pentatricopeptide repeat-containing protein At1g09900 
 sot-r.1   102593853   pentatricopeptide repeat-containing protein At1g09900-like 
 sot-r.1   102587797   pentatricopeptide repeat-containing protein At1g09900 
 nta-r.1   107787111   uncharacterized LOC107787111 
 nta-r.1   107825473   uncharacterized LOC107825473 

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Top 50 coexpressed genes to AT1G09900 (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT1G09900 (ath-m.4.tis coexpression data)

CoexMap"837522"


athAT1G09900 | Entrez gene ID : 837522    
Species ath bra bna ghi gma vvi ppo sot nta cre hvu mtr tae bdi osa zma sly cit sbi
Paralog 9 1 2 2 2 1 1 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0009507 [list] [network] chloroplast  (5014 genes)  ISM  
GO MF
Protein NP_172461.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  cyto_nucl 4,  cyto 1,  pero 1,  plas 1,  E.R. 1,  golg 1,  golg_plas 1,  E.R._plas 1  (predict for NP_172461.1)
Subcellular
localization
TargetP
other 6,  chlo 3  (predict for NP_172461.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
AT1G09900
ath-u.5
for
AT1G09900
ath-r.7
for
AT1G09900
ath-m.9
for
AT1G09900
ath-e.2
for
AT1G09900
ath-m.4.bio
for
AT1G09900
ath-m.4.hor
for
AT1G09900
ath-m.4.lig
for
AT1G09900
ath-m.4.str
for
AT1G09900
bra-r.6
for
103871770
bna-r.1
for
106346231
bna-r.1
for
106400864
ghi-r.1
for
107941798
ghi-r.1
for
121230306
gma-u.5
for
100790449
gma-u.5
for
100791459
vvi-u.5
for
100267729
ppo-u.5
for
7461840
sot-r.1
for
102593853
sot-r.1
for
102587797
nta-r.1
for
107787111
nta-r.1
for
107825473


Ortholog ID: 13211
Species ath bra bna bna ghi ghi gma gma vvi ppo sot sot nta nta
Symbol AT1G09900 LOC103871770 LOC106346231 LOC106400864 LOC107941798 LOC121230306 LOC100790449 LOC100791459 LOC100267729 LOC7461840 LOC102593853 LOC102587797 LOC107787111 LOC107825473
Function* Pentatricopeptide repeat (PPR-like) superfamily protein pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900-like pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900 pentatricopeptide repeat-containing protein At1g09900-like pentatricopeptide repeat-containing protein At1g09900 uncharacterized LOC107787111 uncharacterized LOC107825473
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 837522 103871770 106346231 106400864 107941798 121230306 100790449 100791459 100267729 7461840 102593853 102587797 107787111 107825473
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