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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-m.4.tis   SHA   SH2 domain protein A 
 ath-u.5   SHA   SH2 domain protein A 
 ath-r.7   SHA   SH2 domain protein A 
 ath-m.9   SHA   SH2 domain protein A 
 ath-e.2   SHA   SH2 domain protein A 
 ath-m.4.bio   SHA   SH2 domain protein A 
 ath-m.4.hor   SHA   SH2 domain protein A 
 ath-m.4.lig   SHA   SH2 domain protein A 
 ath-m.4.str   SHA   SH2 domain protein A 
 ath-u.5   SHB   SH2 domain protein B 
 bra-r.6   103875046   SH2 domain-containing protein A 
 bra-r.6   103872490   SH2 domain-containing protein A 
 bna-r.1   106346731   SH2 domain-containing protein A 
 bna-r.1   106365559   SH2 domain-containing protein A 
 ghi-r.1   107941431   SH2 domain-containing protein A 
 ghi-r.1   107885992   SH2 domain-containing protein A 
 cit-r.1   102614546   SH2 domain-containing protein B-like 
 gma-u.5   100803169   SH2 domain-containing protein A 
 vvi-u.5   100260583   SH2 domain-containing protein A 
 ppo-u.5   18103322   SH2 domain-containing protein A 
 ppo-u.5   7459132   SH2 domain-containing protein A 
 mtr-u.5   25502489   SH2 domain-containing protein A 
 sly-u.5   101252101   SH2 domain-containing protein A 
 sot-r.1   102592228   uncharacterized LOC102592228 
 nta-r.1   107796828   SH2 domain-containing protein A 
 nta-r.1   107775818   SH2 domain-containing protein A 
 osa-u.5   4349432   SH2 domain-containing protein A 
 tae-r.2   123181639   SH2 domain-containing protein B 
 tae-r.2   123128101   SH2 domain-containing protein B 
 tae-r.2   123052000   SH2 domain-containing protein B 
 hvu-r.1   123438875   SH2 domain-containing protein A-like 
 sbi-r.1   8059855   uncharacterized LOC8059855 
 bdi-r.1   100829512   SH2 domain-containing protein A 

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Top 50 coexpressed genes to SHA (ath-m.4.tis coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to SHA (ath-m.4.tis coexpression data)

CoexMap"838274"


athSHA | Entrez gene ID : 838274      
Species ath bra bna ghi cit gma vvi ppo mtr sly sot nta osa tae hvu sbi bdi cre zma
Paralog 10 2 2 2 1 1 1 2 1 1 1 2 1 3 1 1 1 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (10367 genes)  ISM  
GO MF
Protein NP_001185018.1 [sequence] [blastp]
NP_001321275.1 [sequence] [blastp]
NP_173147.2 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 2,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for NP_001185018.1)
cyto 5,  nucl 2,  cysk 1,  chlo 1,  vacu 1,  cysk_plas 1  (predict for NP_001321275.1)
cyto 4,  nucl 3,  chlo 1,  nucl_plas 1  (predict for NP_173147.2)
Subcellular
localization
TargetP
other 9  (predict for NP_001185018.1)
other 9  (predict for NP_001321275.1)
other 9  (predict for NP_173147.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Condition-specific* Reference

ath-m.4.tis
for
SHA
ath-u.5
for
SHA
ath-r.7
for
SHA
ath-m.9
for
SHA
ath-e.2
for
SHA
ath-m.4.bio
for
SHA
ath-m.4.hor
for
SHA
ath-m.4.lig
for
SHA
ath-m.4.str
for
SHA
ath-u.5
for
SHB
bra-r.6
for
103875046
bra-r.6
for
103872490
bna-r.1
for
106346731
bna-r.1
for
106365559
ghi-r.1
for
107941431
ghi-r.1
for
107885992
cit-r.1
for
102614546
gma-u.5
for
100803169
vvi-u.5
for
100260583
ppo-u.5
for
18103322
ppo-u.5
for
7459132
mtr-u.5
for
25502489
sly-u.5
for
101252101
sot-r.1
for
102592228
nta-r.1
for
107796828
nta-r.1
for
107775818
osa-u.5
for
4349432
tae-r.2
for
123181639
tae-r.2
for
123128101
tae-r.2
for
123052000
hvu-r.1
for
123438875
sbi-r.1
for
8059855
bdi-r.1
for
100829512


Ortholog ID: 9782
Species ath ath bra bra bna bna ghi ghi cit gma vvi ppo ppo mtr sly sot nta nta osa tae tae tae hvu sbi bdi
Symbol SHA SHB LOC103875046 LOC103872490 LOC106346731 LOC106365559 LOC107941431 LOC107885992 LOC102614546 LOC100803169 LOC100260583 LOC18103322 LOC7459132 LOC25502489 LOC101252101 LOC102592228 LOC107796828 LOC107775818 LOC4349432 LOC123181639 LOC123128101 LOC123052000 LOC123438875 LOC8059855 LOC100829512
Function* SH2 domain protein A SH2 domain protein B SH2 domain-containing protein A SH2 domain-containing protein A SH2 domain-containing protein A SH2 domain-containing protein A SH2 domain-containing protein A SH2 domain-containing protein A SH2 domain-containing protein B-like SH2 domain-containing protein A SH2 domain-containing protein A SH2 domain-containing protein A SH2 domain-containing protein A SH2 domain-containing protein A SH2 domain-containing protein A uncharacterized LOC102592228 SH2 domain-containing protein A SH2 domain-containing protein A SH2 domain-containing protein A SH2 domain-containing protein B SH2 domain-containing protein B SH2 domain-containing protein B SH2 domain-containing protein A-like uncharacterized LOC8059855 SH2 domain-containing protein A
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03015 mRNA surveillance pathway 2
vvi01240 Biosynthesis of cofactors 2
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00513 Various types of N-glycan biosynthesis 2
nta00600 Sphingolipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00513 Various types of N-glycan biosynthesis 2
nta01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 6
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 7
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03082 ATP-dependent chromatin remodeling 2
sbi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 838274 844190 103875046 103872490 106346731 106365559 107941431 107885992 102614546 100803169 100260583 18103322 7459132 25502489 101252101 102592228 107796828 107775818 4349432 123181639 123128101 123052000 123438875 8059855 100829512
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